| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00050725m |
| Family | CE6 |
| Protein Properties | Length: 261 Molecular Weight: 28109.7 Isoelectric Point: 10.7089 |
| Chromosome | Chromosome/Scaffold: 073473 Start: 1169 End: 1951 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE6 | 92 | 189 | 1.9e-29 |
| GPGMPFAHALLRSRRLPPHALVGLVPCAQGATPIADWERGTHLYQRMLHRARAATAGNGKLAALLWYQGEADTISRRDAELYAGRMEAFVRDVRRDLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 261 Download |
| MAALRLMLLL LLLHLGAAAA NRTTPLVSFL LAGQSNMGGR GGATSGGRWD GVVPPECAPS 60 PRILRLSPEL RWDEAREPLH RGIDLHNVLG VGPGMPFAHA LLRSRRLPPH ALVGLVPCAQ 120 GATPIADWER GTHLYQRMLH RARAATAGNG KLAALLWYQG EADTISRRDA ELYAGRMEAF 180 VRDVRRDLGM PDLLVIQVGL ATGQGKFVDL VRAAQKRVVL SNVRYVDARG LPVANDYTHL 240 TTAAQVKLGT MLANSYLATL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd01831 | Endoglucanase_E_like | 0.002 | 169 | 253 | 91 | + Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. | ||
| pfam03629 | DUF303 | 1.0e-33 | 29 | 258 | 281 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY92660.1 | 0 | 24 | 260 | 26 | 264 | hypothetical protein OsI_14409 [Oryza sativa Indica Group] |
| RefSeq | NP_001051957.1 | 0 | 29 | 260 | 33 | 266 | Os03g0857600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150914.1 | 0 | 18 | 258 | 20 | 263 | receptor protein kinase-like protein [Zea mays] |
| RefSeq | XP_002461948.1 | 0 | 29 | 260 | 32 | 268 | hypothetical protein SORBIDRAFT_02g011020 [Sorghum bicolor] |
| RefSeq | XP_002466062.1 | 0 | 29 | 258 | 33 | 275 | hypothetical protein SORBIDRAFT_01g000530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 29 | 260 | 25 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 29 | 260 | 25 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 29 | 260 | 25 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 29 | 260 | 25 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 7e-18 | 28 | 249 | 4 | 217 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
