Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00050755m |
Family | GH17 |
Protein Properties | Length: 406 Molecular Weight: 41822.1 Isoelectric Point: 4.4878 |
Chromosome | Chromosome/Scaffold: 072118 Start: 2088 End: 3548 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 5 | 315 | 0 |
IGVNYGTIADNLPPPASTASLLMSTSIGKLRLYEPQPELVAALAGSNISILLGIPNGDVPNLASSPAAAASWAAANIPTTVTVSAISVGNELLNSGNPTL APQLLPAMQNLLAALPAGSTTKISTVHSMAVLSASDPPSSGAFHQDLASSLDPVLDFLHQNGAPFMINPYPYFAYASDTRPETLAFCLFQPNAGRVDAVS GLTYTNMFDAQLDAIRAALDAKGYGDVDIVIAETGWPYKGDADEAGATVDNAKAYVGNLVAHLKSQAGTPRTPGKSVDTYIFALYDENLKSGPESERSFG LYKADLTANYD |
Full Sequence |
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Protein Sequence Length: 406 Download |
SQSFIGVNYG TIADNLPPPA STASLLMSTS IGKLRLYEPQ PELVAALAGS NISILLGIPN 60 GDVPNLASSP AAAASWAAAN IPTTVTVSAI SVGNELLNSG NPTLAPQLLP AMQNLLAALP 120 AGSTTKISTV HSMAVLSASD PPSSGAFHQD LASSLDPVLD FLHQNGAPFM INPYPYFAYA 180 SDTRPETLAF CLFQPNAGRV DAVSGLTYTN MFDAQLDAIR AALDAKGYGD VDIVIAETGW 240 PYKGDADEAG ATVDNAKAYV GNLVAHLKSQ AGTPRTPGKS VDTYIFALYD ENLKSGPESE 300 RSFGLYKADL TANYDAGLAK SGGTAAPTIV TPSPPQGTLQ PSRGTTPTGF CQTTAAVPGS 360 TQGQQVPLSS SCYIPAGAVP RRADAGTWQL AWFGVLLWLA MVAGM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-10 | 86 | 309 | 228 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-84 | 5 | 315 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94756.1 | 0 | 1 | 402 | 26 | 423 | Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74801.1 | 0 | 1 | 402 | 26 | 436 | hypothetical protein OsI_10603 [Oryza sativa Indica Group] |
RefSeq | NP_001049445.1 | 0 | 1 | 402 | 42 | 452 | Os03g0227400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 1 | 405 | 26 | 427 | LOC100280934 [Zea mays] |
RefSeq | XP_002468213.1 | 0 | 1 | 403 | 28 | 430 | hypothetical protein SORBIDRAFT_01g041880 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 5 | 319 | 2 | 316 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
PDB | 3f55_C | 0 | 5 | 319 | 2 | 316 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
PDB | 3f55_B | 0 | 5 | 319 | 2 | 316 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
PDB | 3f55_A | 0 | 5 | 319 | 2 | 316 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
PDB | 3em5_D | 0 | 5 | 319 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR962789 | 276 | 1 | 276 | 0 |
CB683628 | 259 | 61 | 319 | 0 |
CB670174 | 235 | 1 | 235 | 0 |
CK207405 | 322 | 1 | 322 | 0 |
FL818622 | 244 | 1 | 243 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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