| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051027m |
| Family | AA1 |
| Protein Properties | Length: 541 Molecular Weight: 60374.1 Isoelectric Point: 7.1589 |
| Chromosome | Chromosome/Scaffold: 0233476 Start: 170 End: 1913 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 28 | 287 | 1.6e-23 |
| TFPGPTVEALQGVPLWVTWENHLHDRHILPWDPTVPTAIPRASGVPTVVHLHGGVHPPRPDGHANAWFTAGFRERGPTWSTPTYAYPNSPGVLWYHDHAL GLTRANLLAGLLGAYVIRNRAVEAPLGLPCGDDFDRVLVLADRSFYADGSIYMNCTGVDPSVHPQWQPEYFGVAVTVNGKAWPFLPVARRRYRFRIINAS NARYFNLSLSNGLPFHVVGSDTRYLPRPAAVTHLLVAVAETFDVVVDFSESATPEAELVN | |||
| Full Sequence |
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| Protein Sequence Length: 541 Download |
| MYEKKWKFHR DLPATTVFAF GTSAESATFP GPTVEALQGV PLWVTWENHL HDRHILPWDP 60 TVPTAIPRAS GVPTVVHLHG GVHPPRPDGH ANAWFTAGFR ERGPTWSTPT YAYPNSPGVL 120 WYHDHALGLT RANLLAGLLG AYVIRNRAVE APLGLPCGDD FDRVLVLADR SFYADGSIYM 180 NCTGVDPSVH PQWQPEYFGV AVTVNGKAWP FLPVARRRYR FRIINASNAR YFNLSLSNGL 240 PFHVVGSDTR YLPRPAAVTH LLVAVAETFD VVVDFSESAT PEAELVNTAP DPYPDGDAPS 300 RLSGKVMKFA VEPATVWDDH SRVPARLPDY VKVAEEEAAQ RRYIVMYEDE DEATGSPTHL 360 YINGKRQEDP ATETPRAGTT EVWEVINLTQ DNHPLHLHLA AFQAVRARGL VGLEEFKRCM 420 ERLNDAARCD VGRHAMGEEA AVPEHERTWK KRGEDRAGVH DDGGGEVPDG HCIKKERFLR 480 ITTMHGKPCP PACQDVNPIL RVILHKTKQP RRERLKDTPR KRDDRGYWLQ PQSSSPPRAG 540 * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 5.0e-7 | 161 | 275 | 119 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-8 | 28 | 148 | 129 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10883 | PRK10883 | 5.0e-15 | 103 | 277 | 182 | + FtsI repressor; Provisional | ||
| PRK10965 | PRK10965 | 4.0e-19 | 19 | 276 | 267 | + multicopper oxidase; Provisional | ||
| COG2132 | SufI | 5.0e-35 | 27 | 403 | 379 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ10376.1 | 0 | 1 | 451 | 74 | 525 | hypothetical protein OsJ_00212 [Oryza sativa Japonica Group] |
| GenBank | EAZ22879.1 | 0 | 1 | 451 | 74 | 525 | hypothetical protein OsJ_06565 [Oryza sativa Japonica Group] |
| RefSeq | NP_001041895.1 | 0 | 1 | 451 | 74 | 525 | Os01g0126100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455264.1 | 0 | 1 | 451 | 78 | 531 | hypothetical protein SORBIDRAFT_03g007440 [Sorghum bicolor] |
| RefSeq | XP_002457447.1 | 0 | 1 | 451 | 72 | 532 | hypothetical protein SORBIDRAFT_03g007480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4akq_A | 0 | 1 | 408 | 32 | 434 | A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: E498d Mut |
| PDB | 3zdw_A | 0 | 1 | 408 | 32 | 434 | A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: E498d Mut |
| PDB | 2x88_A | 0 | 1 | 408 | 32 | 434 | A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: E498d Mut |
| PDB | 2x87_A | 0 | 1 | 408 | 32 | 434 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 2bhf_A | 0 | 1 | 408 | 32 | 434 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778093 | 454 | 1 | 451 | 0 |
| HO796521 | 401 | 54 | 451 | 0 |
| FE648777 | 227 | 1 | 225 | 0 |
| DR690750 | 279 | 7 | 283 | 0 |
| EL443532 | 295 | 6 | 297 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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