| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051092m |
| Family | GH1 |
| Protein Properties | Length: 120 Molecular Weight: 13803.4 Isoelectric Point: 6.0963 |
| Chromosome | Chromosome/Scaffold: 0235613 Start: 1 End: 1176 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 2 | 102 | 2e-35 |
| EKYGNLTFYIQENGYGGSDGTLNDLERIDYLTKYIAGTLKAIRKGADVRGYNVWSLFDLYELFGGFKSHYGLVAVDFDTDERRRQPRHSAHWYSDFLKNN A | |||
| Full Sequence |
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| Protein Sequence Length: 120 Download |
| MEKYGNLTFY IQENGYGGSD GTLNDLERID YLTKYIAGTL KAIRKGADVR GYNVWSLFDL 60 YELFGGFKSH YGLVAVDFDT DERRRQPRHS AHWYSDFLKN NAAIELEYDF TTKISHAQI* 120 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 1.0e-24 | 2 | 94 | 97 | + beta-galactosidase. | ||
| PLN02814 | PLN02814 | 3.0e-25 | 2 | 99 | 99 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 1.0e-26 | 2 | 99 | 99 | + beta-glucosidase | ||
| pfam00232 | Glyco_hydro_1 | 6.0e-28 | 2 | 102 | 105 | + Glycosyl hydrolase family 1. | ||
| PLN02849 | PLN02849 | 1.0e-29 | 2 | 103 | 105 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | B9FHH2 | 0 | 2 | 119 | 398 | 517 | BGL20_ORYSJ RecName: Full=Beta-glucosidase 20; Short=Os5bglu20; Flags: Precursor |
| DDBJ | BAF17243.2 | 0 | 2 | 119 | 332 | 451 | Os05g0366000 [Oryza sativa Japonica Group] |
| GenBank | EEC79077.1 | 0 | 2 | 119 | 185 | 304 | hypothetical protein OsI_19668 [Oryza sativa Indica Group] |
| RefSeq | NP_001055329.1 | 0 | 2 | 119 | 349 | 468 | Os05g0366000 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q60DY1 | 0 | 2 | 119 | 395 | 514 | BGL21_ORYSJ RecName: Full=Beta-glucosidase 21; Short=Os5bglu21; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wcg_B | 5e-18 | 3 | 98 | 364 | 459 | A Chain A, Aphid Myrosinase |
| PDB | 1wcg_A | 5e-18 | 3 | 98 | 364 | 459 | A Chain A, Aphid Myrosinase |
| PDB | 4hz8_A | 3e-17 | 4 | 101 | 340 | 440 | A Chain A, Aphid Myrosinase |
| PDB | 4hz7_A | 3e-17 | 4 | 101 | 340 | 440 | A Chain A, Aphid Myrosinase |
| PDB | 4hz6_A | 3e-17 | 4 | 101 | 340 | 440 | A Chain A, Crystal Structure Of Bglb |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FL883030 | 120 | 1 | 120 | 0 |
| FL746059 | 120 | 1 | 120 | 0 |
| FL746058 | 120 | 1 | 120 | 0 |
| JG964431 | 119 | 2 | 120 | 0 |
| FE644495 | 119 | 2 | 120 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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