| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051105m |
| Family | AA1 |
| Protein Properties | Length: 378 Molecular Weight: 42481.3 Isoelectric Point: 6.4281 |
| Chromosome | Chromosome/Scaffold: 023534 Start: 156 End: 3761 |
| Description | laccase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 9 | 354 | 0 |
| KDGFVLDVETGMTYLLRLINAALFTEFYLKIAGHKFTVVASDANYVNPYTTDTIAIAPGETTDVLVVADAPPGKYYMVAVALQTPKPDQQLPFFMTSGTV QYRSHNNGTRGHHNVAPVVPDLPDQHDTMTTYYFHGNMTSLRHPRRPQVPVHADEHFFVTLSDGSICRHGHPSCKRSVDLFMLPNSPPRVFNFTDLSLVP DGPMEAELEATEKRMVGRRFRHGTTVEVVFQNTALMQTGSHPMHLHGHDMFVLAQDHGIYAAAKDVAKYNLVDPPVKNTVVVPRLGWIALRFVADNPGVW YVHCHFDFHNNDLMAAVFIVEDGPTVASILPPPPDDLPNCNHDDDN | |||
| Full Sequence |
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| Protein Sequence Length: 378 Download |
| YFNYEGIVKD GFVLDVETGM TYLLRLINAA LFTEFYLKIA GHKFTVVASD ANYVNPYTTD 60 TIAIAPGETT DVLVVADAPP GKYYMVAVAL QTPKPDQQLP FFMTSGTVQY RSHNNGTRGH 120 HNVAPVVPDL PDQHDTMTTY YFHGNMTSLR HPRRPQVPVH ADEHFFVTLS DGSICRHGHP 180 SCKRSVDLFM LPNSPPRVFN FTDLSLVPDG PMEAELEATE KRMVGRRFRH GTTVEVVFQN 240 TALMQTGSHP MHLHGHDMFV LAQDHGIYAA AKDVAKYNLV DPPVKNTVVV PRLGWIALRF 300 VADNPGVWYV HCHFDFHNND LMAAVFIVED GPTVASILPP PPDDLPNCNH DDDNVFNELY 360 LYNELLQHRK FRCPIRV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-29 | 227 | 332 | 106 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 8.0e-36 | 12 | 326 | 353 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 8.0e-37 | 13 | 327 | 333 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 5.0e-44 | 12 | 326 | 336 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 8.0e-85 | 9 | 333 | 360 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE50804.1 | 0 | 2 | 173 | 216 | 386 | hypothetical protein OsJ_31178 [Oryza sativa Japonica Group] |
| GenBank | EEE50804.1 | 0 | 7 | 345 | 388 | 766 | hypothetical protein OsJ_31178 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064399.1 | 0 | 2 | 345 | 216 | 599 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002449982.1 | 0 | 2 | 331 | 208 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 2 | 353 | 206 | 598 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-31 | 12 | 326 | 204 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate |
| PDB | 1asq_A | 2e-31 | 12 | 326 | 204 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate |
| PDB | 1asp_B | 2e-31 | 12 | 326 | 204 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate |
| PDB | 1asp_A | 2e-31 | 12 | 326 | 204 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate |
| PDB | 1aso_B | 2e-31 | 12 | 326 | 204 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CA146254 | 237 | 124 | 317 | 0 |
| EG387833 | 282 | 74 | 317 | 0 |
| JK593019 | 248 | 124 | 334 | 0 |
| FL915596 | 176 | 10 | 184 | 0 |
| EG390413 | 184 | 2 | 185 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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