| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051133m |
| Family | GT1 |
| Protein Properties | Length: 522 Molecular Weight: 57346.3 Isoelectric Point: 6.3721 |
| Chromosome | Chromosome/Scaffold: 023437 Start: 2040 End: 6923 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 232 | 513 | 1.3e-32 |
| ESTLLLYGFSKEIVECPGYWPSSAHACGFWFLPTAWQFSCDKCLELSRNMNSSLGSVLCAKHSSMEHFLVGNSYSSRPVFVGLSSIGSMGFLRNPKAFLM VLKAAIESTDYRFILFSSGYQPLDSAIQSIASSAPKSSEAEASSLSDDSTLLFNVGFSAFPGESIPYSWLFPRCAVAIHHAGSGSTAAALLAGIPQVVCP FLLDQFYWAERLHWLGVAPAPLQRQHLIPDNDDPSSIHNAAEVLRGAIKSALFPEIKAQATSIADRLSFEDGIGEAIRILKE | |||
| Full Sequence |
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| Protein Sequence Length: 522 Download |
| MAGGGGRPRA VFMAFGTRGD VFPVAALAAA FARDQQQYAV VFITHSAHRS LAGHLAASNV 60 RCMPVSSPPV LAAEQVENIS CGSQSNHGDE SFSSRKMVIQ VEHRKECLSS LEEVFGDDPS 120 INGDFIVINF FALEGWHLAE LFQVKCIIAA PYFVPYSAPS SFHHQFKHNF PLLYKYFQEA 180 PTNTVSWTDI IHWMWALFTE SWGSWRSNCL NLSPIPFTDP VTNLPLWHMR EESTLLLYGF 240 SKEIVECPGY WPSSAHACGF WFLPTAWQFS CDKCLELSRN MNSSLGSVLC AKHSSMEHFL 300 VGNSYSSRPV FVGLSSIGSM GFLRNPKAFL MVLKAAIEST DYRFILFSSG YQPLDSAIQS 360 IASSAPKSSE AEASSLSDDS TLLFNVGFSA FPGESIPYSW LFPRCAVAIH HAGSGSTAAA 420 LLAGIPQVVC PFLLDQFYWA ERLHWLGVAP APLQRQHLIP DNDDPSSIHN AAEVLRGAIK 480 SALFPEIKAQ ATSIADRLSF EDGIGEAIRI LKERVLIQGQ T* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 4.0e-6 | 307 | 516 | 210 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 1.0e-30 | 8 | 513 | 506 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36224.1 | 0 | 11 | 520 | 14 | 523 | unknown [Zea mays] |
| EMBL | CBI23867.1 | 0 | 13 | 521 | 1 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_568452.2 | 0 | 10 | 517 | 12 | 512 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002273501.1 | 0 | 7 | 521 | 277 | 784 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528612.1 | 0 | 7 | 519 | 10 | 512 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iir_A | 0.00000000004 | 309 | 515 | 240 | 398 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4t_A | 0.0000000004 | 398 | 518 | 278 | 384 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 0.0000000004 | 398 | 518 | 278 | 384 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_B | 0.000000005 | 294 | 521 | 211 | 393 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_A | 0.000000005 | 294 | 521 | 211 | 393 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CA616406 | 366 | 2 | 353 | 0 |
| EE177484 | 260 | 11 | 269 | 0 |
| CA616408 | 170 | 185 | 353 | 0 |
| CA616408 | 174 | 3 | 175 | 0 |
| EE021012 | 248 | 11 | 257 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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