| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051656m |
| Family | GT28 |
| Protein Properties | Length: 532 Molecular Weight: 56716.8 Isoelectric Point: 9.017 |
| Chromosome | Chromosome/Scaffold: 023225 Start: 1819 End: 6597 |
| Description | monogalactosyl diacylglycerol synthase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT28 | 348 | 506 | 2.9e-30 |
| VLLMGGGEGMGPIEATAKALGDTLYDEILGEPTGQILVICGRNKKLANRLQSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILN DYIAGQEAGNVPYVVENGCGKFSKSPKQNAKIVADWFGPKSDEFRVMSQNCLKLARPDA | |||
| Full Sequence |
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| Protein Sequence Length: 532 Download |
| MPAPTAEPAL PAAFLCVPSP LLSAPLPGAA AASPAPCPRH ASFLPRPRGG PPRALSAAVS 60 APGPASSAAS RIHRMWGEFA RFVRLHGNQI APLGFASLGL GGGGGGNAGG GGGGGGGGSG 120 GDVDGVGEVE EAAARAEAPK KVLILMSDTG GGHRASAEAI KAAFIQEFGD DYQVFVTDLW 180 TDHTPWPFNQ LPRSYSFLVK HGPLWKMTYY GTAPRVVHQP HFAATSTFIA REVAKGLMKY 240 QPDVIISVHP LMQHVPLRIL RSKGLLDKIP FTTVITDLST CHPTWFHKLV TRCYCPSTEV 300 EKRALKAGLK PSQIKVYGLP VRPSFVKPVR PKDELRRELG MDEDLPAVLL MGGGEGMGPI 360 EATAKALGDT LYDEILGEPT GQILVICGRN KKLANRLQSI NWKVPVQVKG FVTKMEECMG 420 ACDCIITKAG PGTIAEAMIR GLPIILNDYI AGQEAGNVPY VVENGCGKFS KSPKQNAKIV 480 ADWFGPKSDE FRVMSQNCLK LARPDAVFKI VHDLHELVRQ KCFVPQYACA T* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0707 | MurG | 5.0e-27 | 141 | 511 | 380 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK13608 | PRK13608 | 9.0e-33 | 237 | 518 | 285 | + diacylglycerol glucosyltransferase; Provisional | ||
| PRK13609 | PRK13609 | 9.0e-41 | 140 | 517 | 390 | + diacylglycerol glucosyltransferase; Provisional | ||
| pfam06925 | MGDG_synth | 6.0e-73 | 153 | 321 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
| PLN02605 | PLN02605 | 0 | 142 | 521 | 382 | + monogalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84568.1 | 0 | 1 | 531 | 1 | 529 | unknown [Zea mays] |
| RefSeq | NP_001142118.1 | 0 | 1 | 531 | 1 | 529 | hypothetical protein LOC100274282 [Zea mays] |
| Swiss-Prot | Q69QJ7 | 0 | 65 | 531 | 69 | 535 | MGDG1_ORYSJ RecName: Full=Probable monogalactosyldiacylglycerol synthase 1, chloroplastic; Short=OsMGD1; Flags: Precursor |
| RefSeq | XP_002309689.1 | 0 | 43 | 531 | 49 | 537 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002462401.1 | 0 | 1 | 531 | 1 | 534 | hypothetical protein SORBIDRAFT_02g025070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 0.007 | 394 | 519 | 227 | 356 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | 2.4.1.46-RXN | EC-2.4.1.46 | monogalactosyldiacylglycerol synthase |
| traumatin and (Z)-3-hexen-1-yl acetate biosynthesis | HYDROHEX-RXN | - | 13(S)-hydroperoxyoctadeca-9,11-dienoate lyase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT049228 | 339 | 185 | 523 | 0 |
| EX267973 | 342 | 169 | 510 | 0 |
| CV530540 | 293 | 139 | 431 | 0 |
| EX260172 | 299 | 166 | 464 | 0 |
| HO466477 | 382 | 139 | 520 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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