| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051820m |
| Family | GH9 |
| Protein Properties | Length: 194 Molecular Weight: 21765.3 Isoelectric Point: 6.0784 |
| Chromosome | Chromosome/Scaffold: 0235851 Start: 1028 End: 1954 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 2 | 180 | 0 |
| HALEAIKWGTDYFVKAHTEPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRIDRDNPGSDLAGETAAALAAASIVFRRSNPHYSHLLLHHAKQLFEFGDR YRGTYDSSIAEARSYYASVSGYRDELLWAALWLHRATGRAEYLDYAAAMADEFGGVVWAMTEFSWDVKYAGVQVLAAKV | |||
| Full Sequence |
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| Protein Sequence Length: 194 Download |
| GHALEAIKWG TDYFVKAHTE PFVYWAEVGD GDTDHYCWQR PEDMTTSRQA YRIDRDNPGS 60 DLAGETAAAL AAASIVFRRS NPHYSHLLLH HAKQLFEFGD RYRGTYDSSI AEARSYYASV 120 SGYRDELLWA ALWLHRATGR AEYLDYAAAM ADEFGGVVWA MTEFSWDVKY AGVQVLAAKV 180 RAIPCPSITS RLI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 2.0e-72 | 1 | 179 | 179 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-75 | 1 | 181 | 183 | + Glycosyl hydrolase family 9. | ||
| PLN02340 | PLN02340 | 3.0e-85 | 1 | 180 | 180 | + endoglucanase | ||
| PLN02171 | PLN02171 | 6.0e-102 | 1 | 180 | 180 | + endoglucanase | ||
| PLN02420 | PLN02420 | 3.0e-103 | 2 | 180 | 179 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD26550.1 | 0 | 2 | 180 | 118 | 296 | putative endo-beta-1,4-glucanase precursor [Oryza sativa Japonica Group] |
| GenBank | EAZ44630.1 | 0 | 2 | 191 | 119 | 307 | hypothetical protein OsJ_29250 [Oryza sativa Japonica Group] |
| RefSeq | NP_001063092.1 | 0 | 2 | 180 | 27 | 205 | Os09g0394300 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q6H3Z9 | 0 | 2 | 180 | 142 | 320 | GUN22_ORYSJ RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; AltName: Full=OsGLU11; Flags: Precursor |
| RefSeq | XP_002462339.1 | 0 | 1 | 180 | 132 | 311 | hypothetical protein SORBIDRAFT_02g024050 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 5 | 180 | 94 | 267 | A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 From Ostrinia Furnacalis |
| PDB | 1ksc_A | 0 | 5 | 180 | 94 | 267 | A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 From Ostrinia Furnacalis |
| PDB | 1ks8_A | 0 | 5 | 180 | 94 | 267 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 2e-38 | 2 | 181 | 113 | 295 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 1e-33 | 5 | 179 | 95 | 273 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EE047441 | 180 | 1 | 180 | 0 |
| FL691539 | 180 | 1 | 180 | 0 |
| BI778632 | 179 | 2 | 180 | 0 |
| FC898934 | 181 | 2 | 182 | 0 |
| DY276095 | 181 | 2 | 182 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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