Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00051908m |
Family | GT37 |
Protein Properties | Length: 576 Molecular Weight: 64927.3 Isoelectric Point: 7.8072 |
Chromosome | Chromosome/Scaffold: 023456 Start: 4871 End: 7298 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 94 | 544 | 0 |
VTMESSKVQRDKLIGGLLAPGFEEQSCLSRYQSALYRKESPHLLSAYLLERLREHEVLQKKCGPHTESYKKAIEQLKSGQDIEVGDCNYLVWVSYSGLGN RILTITSAFLYAILTNRVLLVDGDKGTADLFCEPFPETSWLLPSDFPINQFKNLNIGSPESYGKMLKTANIHSDGSFKGPKPTFIYLHLAHDYDDYDKLF FCEHSQQHLQRIPWLILRSDNYFVPSLFLIPAYQEELMRLFPQKDAVFHHLGRYLFHPTNVVWGLITRYFDSYLARADEKLGIQIRVFDTETGPFQHVLD QVLSCTLKENLLPEVNAQQPIVSTRKVKSKVVLITSLNSGYYERIRTMYWEHPTSNGEIISFHQPSHEEHQDSDKKMHNMKAWAEIYLLSLSDVMVTSAW STFGYVAQGLSGLKTWLMFKPENHTVPNPPCRQVMSMEPCFHAPPFYDCKA |
Full Sequence |
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Protein Sequence Length: 576 Download |
MDIKERIRRS PPPPTPPAAP APGHPRGTKG RVAVLPLSVA ALVACGVLLL LLLSGGSAAR 60 RGGQFLDADP ATARPSGDGR GGLHQARPRD GGHVTMESSK VQRDKLIGGL LAPGFEEQSC 120 LSRYQSALYR KESPHLLSAY LLERLREHEV LQKKCGPHTE SYKKAIEQLK SGQDIEVGDC 180 NYLVWVSYSG LGNRILTITS AFLYAILTNR VLLVDGDKGT ADLFCEPFPE TSWLLPSDFP 240 INQFKNLNIG SPESYGKMLK TANIHSDGSF KGPKPTFIYL HLAHDYDDYD KLFFCEHSQQ 300 HLQRIPWLIL RSDNYFVPSL FLIPAYQEEL MRLFPQKDAV FHHLGRYLFH PTNVVWGLIT 360 RYFDSYLARA DEKLGIQIRV FDTETGPFQH VLDQVLSCTL KENLLPEVNA QQPIVSTRKV 420 KSKVVLITSL NSGYYERIRT MYWEHPTSNG EIISFHQPSH EEHQDSDKKM HNMKAWAEIY 480 LLSLSDVMVT SAWSTFGYVA QGLSGLKTWL MFKPENHTVP NPPCRQVMSM EPCFHAPPFY 540 DCKARRGADT GKLVPHVRHC EDMSWGLKLV DTDEW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.0003 | 189 | 215 | 27 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 88 | 544 | 459 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD17113.1 | 0 | 1 | 575 | 1 | 572 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EAY87645.1 | 0 | 1 | 557 | 1 | 554 | hypothetical protein OsI_09054 [Oryza sativa Indica Group] |
GenBank | EEE57856.1 | 0 | 1 | 557 | 1 | 508 | hypothetical protein OsJ_08492 [Oryza sativa Japonica Group] |
RefSeq | NP_001048215.1 | 0 | 7 | 575 | 1 | 566 | Os02g0764400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452879.1 | 0 | 1 | 574 | 3 | 579 | hypothetical protein SORBIDRAFT_04g034120 [Sorghum bicolor] |