| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00051916m |
| Family | AA1 |
| Protein Properties | Length: 313 Molecular Weight: 34033.7 Isoelectric Point: 6.7887 |
| Chromosome | Chromosome/Scaffold: 0230547 Start: 945 End: 1979 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 1 | 298 | 0 |
| MISPGQTMNALLVADRPTDGTGNSRYYMAARTFASNTQLSANNSTATAILEYTDAPPSAGPPDLPSLPAVNDIAAATAYTAQLRSLVTKDHPVDVPTHVD EHMLVTLAVNLLPCGANETCKGPISGTTRLAASLNNVSFVLPPVDVLDAYYYSIRGVYEPDFPNKPPFFFNFTDRLPLELSFTKRGTKVKVVEYGAVVEV VFQDTGILGAESHPMHLHGFSFYVVGRGFGNFDKNTDPATYNLVDPPYQNTVSVPKAGWAAIRFRAANPGAWFMHCHFDRHTVWGMDTVFIVKNGKTP | |||
| Full Sequence |
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| Protein Sequence Length: 313 Download |
| MISPGQTMNA LLVADRPTDG TGNSRYYMAA RTFASNTQLS ANNSTATAIL EYTDAPPSAG 60 PPDLPSLPAV NDIAAATAYT AQLRSLVTKD HPVDVPTHVD EHMLVTLAVN LLPCGANETC 120 KGPISGTTRL AASLNNVSFV LPPVDVLDAY YYSIRGVYEP DFPNKPPFFF NFTDRLPLEL 180 SFTKRGTKVK VVEYGAVVEV VFQDTGILGA ESHPMHLHGF SFYVVGRGFG NFDKNTDPAT 240 YNLVDPPYQN TVSVPKAGWA AIRFRAANPG AWFMHCHFDR HTVWGMDTVF IVKNGKTPDA 300 QMMPRPTTMP KC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 2.0e-26 | 2 | 299 | 305 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 5.0e-30 | 2 | 302 | 310 | + oxidoreductase | ||
| pfam07731 | Cu-oxidase_2 | 8.0e-34 | 208 | 295 | 88 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03388 | ascorbase | 3.0e-37 | 2 | 302 | 308 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 5.0e-115 | 1 | 312 | 313 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF79418.1 | 0 | 1 | 312 | 102 | 412 | unknown [Zea mays] |
| RefSeq | NP_001105915.1 | 0 | 1 | 312 | 272 | 584 | putative laccase [Zea mays] |
| RefSeq | XP_002452548.1 | 0 | 1 | 312 | 280 | 590 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| RefSeq | XP_002452900.1 | 0 | 1 | 312 | 265 | 578 | hypothetical protein SORBIDRAFT_04g034610 [Sorghum bicolor] |
| RefSeq | XP_002452901.1 | 0 | 1 | 312 | 272 | 585 | hypothetical protein SORBIDRAFT_04g034620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 3e-25 | 2 | 298 | 256 | 532 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 1asq_A | 3e-25 | 2 | 298 | 256 | 532 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 1asp_B | 3e-25 | 2 | 298 | 256 | 532 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 1asp_A | 3e-25 | 2 | 298 | 256 | 532 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 1aso_B | 3e-25 | 2 | 298 | 256 | 532 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT803561 | 253 | 60 | 311 | 0 |
| GT784556 | 238 | 77 | 313 | 0 |
| EL738209 | 235 | 80 | 312 | 0 |
| DR452231 | 259 | 18 | 273 | 0 |
| DR906742 | 208 | 107 | 313 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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