Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052022m |
Family | AA1 |
Protein Properties | Length: 417 Molecular Weight: 46687.4 Isoelectric Point: 6.9533 |
Chromosome | Chromosome/Scaffold: 0113856 Start: 195 End: 2629 |
Description | Cupredoxin superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 8 | 337 | 0 |
LGVPDAILINGRAPYRYDTALVPDGLQYEIVGVEPGKTYRFRVHNVGISTSLNFRIQNHNMLLVEAEGTYTNQQNYTNLDIHVGQSYSFLVTMDQNASTD YYIVASPRFISNPQWSQVTGVAILQYSNSKGKASGPLPDAPNDYYDKYYSINQARSIRMNTSAGAARPNPQGSFHYGSINITQTFVLKNEAPLRINGKHR RTINRISYSPPETPLRLADLHNLTGVYTTDFPAMPSNVPAKIASSALNASYKGFLEIIFQNNDSDVQAYHLDGYSFFVVGMDYGEWTPDRRNEYNRWDAI SRCTTQVFPGGWTAVLVSLDNVGIWNLRAE |
Full Sequence |
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Protein Sequence Length: 417 Download |
MLDDGRDLGV PDAILINGRA PYRYDTALVP DGLQYEIVGV EPGKTYRFRV HNVGISTSLN 60 FRIQNHNMLL VEAEGTYTNQ QNYTNLDIHV GQSYSFLVTM DQNASTDYYI VASPRFISNP 120 QWSQVTGVAI LQYSNSKGKA SGPLPDAPND YYDKYYSINQ ARSIRMNTSA GAARPNPQGS 180 FHYGSINITQ TFVLKNEAPL RINGKHRRTI NRISYSPPET PLRLADLHNL TGVYTTDFPA 240 MPSNVPAKIA SSALNASYKG FLEIIFQNND SDVQAYHLDG YSFFVVGMDY GEWTPDRRNE 300 YNRWDAISRC TTQVFPGGWT AVLVSLDNVG IWNLRAEKLD NWYRGQEVYV KVSDPMGYNI 360 TEMVMPDNVL YCGLLKDRQK PQVHESNSKS SAQAEAGCRN RFLATVMLVG AVVIFS* 420 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02991 | PLN02991 | 2.0e-115 | 2 | 373 | 373 | + oxidoreductase |
PLN02835 | PLN02835 | 1.0e-121 | 2 | 373 | 373 | + oxidoreductase |
PLN02168 | PLN02168 | 5.0e-123 | 1 | 373 | 383 | + copper ion binding / pectinesterase |
PLN02354 | PLN02354 | 3.0e-129 | 2 | 382 | 386 | + copper ion binding / oxidoreductase |
PLN00044 | PLN00044 | 0 | 2 | 393 | 393 | + multi-copper oxidase-related protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28977.1 | 0 | 1 | 416 | 1 | 418 | unknown [Zea mays] |
DDBJ | BAC55686.1 | 0 | 1 | 414 | 184 | 598 | putative pectinesterase [Oryza sativa Japonica Group] |
GenBank | EEE68063.1 | 0 | 1 | 414 | 191 | 605 | hypothetical protein OsJ_26072 [Oryza sativa Japonica Group] |
RefSeq | NP_001151974.1 | 0 | 1 | 416 | 160 | 577 | LOC100285611 [Zea mays] |
RefSeq | XP_002445068.1 | 0 | 1 | 416 | 173 | 587 | hypothetical protein SORBIDRAFT_07g003590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1e-34 | 6 | 373 | 162 | 539 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1asq_A | 1e-34 | 6 | 373 | 162 | 539 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1asp_B | 1e-34 | 6 | 373 | 162 | 539 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1asp_A | 1e-34 | 6 | 373 | 162 | 539 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1aso_B | 1e-34 | 6 | 373 | 162 | 539 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO852795 | 385 | 32 | 415 | 0 |
HO796073 | 389 | 2 | 390 | 0 |
CK125352 | 294 | 102 | 394 | 0 |
GO877451 | 312 | 1 | 312 | 0 |
EE592823 | 320 | 34 | 353 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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