Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052109m |
Family | GT20 |
Protein Properties | Length: 865 Molecular Weight: 97288.1 Isoelectric Point: 6.6391 |
Chromosome | Chromosome/Scaffold: 010871 Start: 1266 End: 4057 |
Description | trehalose-phosphatase/synthase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 59 | 546 | 0 |
KRKIVAANFLPLNCMKDEATGDWSFAMDDNQLLVQLKDGFPVDNEVIYVGSLNVQVDPSEQDQVSQKLFKEHKCIPTFLPADLQQQFYHSFCKQHLWPLF HYMLPVFHDKGELFDRSLFQAYVRANKIFAYKVMEAVNSNDDCVWVHDYHLMLVPTFLRKKLHQIKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNADLI GFQTFDYARHFLSCCSRLLGLNYESKRGHIGIEYFGRTVSLKILAAGVHVGRLESMLKLPATISKVQEIKNRYKGKLVILGVDDMDIFKGISLKLLGLEL LLERTPKLRGKVVLVQIVNPARSIGKDIEEAKNEAVSVAQRINDTYGSANYRPVVLIDYLIPFYEKIAYYAASDCCIVNAVRDGMNLIPYEYTVCRQGNE EIDKFRGADKSSLHTSTLIVSEFVGCSPSLSGAFKVNPWSVEDVADAFYSATDLTQYEKIQRHEKHYRYVKSHDVAYWARSFVQDLER |
Full Sequence |
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Protein Sequence Length: 865 Download |
MVLSSYSNLL DICSEDVFDF QQPLQSLPCT VTSASNISGP DLESSNGSDI VGSAPPCLKR 60 KIVAANFLPL NCMKDEATGD WSFAMDDNQL LVQLKDGFPV DNEVIYVGSL NVQVDPSEQD 120 QVSQKLFKEH KCIPTFLPAD LQQQFYHSFC KQHLWPLFHY MLPVFHDKGE LFDRSLFQAY 180 VRANKIFAYK VMEAVNSNDD CVWVHDYHLM LVPTFLRKKL HQIKVGFFLH SPFPSSEIYR 240 TLPVRDEILK SLLNADLIGF QTFDYARHFL SCCSRLLGLN YESKRGHIGI EYFGRTVSLK 300 ILAAGVHVGR LESMLKLPAT ISKVQEIKNR YKGKLVILGV DDMDIFKGIS LKLLGLELLL 360 ERTPKLRGKV VLVQIVNPAR SIGKDIEEAK NEAVSVAQRI NDTYGSANYR PVVLIDYLIP 420 FYEKIAYYAA SDCCIVNAVR DGMNLIPYEY TVCRQGNEEI DKFRGADKSS LHTSTLIVSE 480 FVGCSPSLSG AFKVNPWSVE DVADAFYSAT DLTQYEKIQR HEKHYRYVKS HDVAYWARSF 540 VQDLERTCKE QYSRRCWTTG FGLNFRVIAL SPGFRRLSLE LFASSYKKAN KRVIFLDYDG 600 TLVPQSSLDK APSAELISIL NNLCNDTKNT VFIVSGRGRN SLCEWFDSCE NLGIAAEHGY 660 FIRWSRAAEW EVSSLGQCSE WKLIADPIMH VYMETTDGSS IERKESALVW HYQNTDHDFG 720 SCQAKELVGH LERVLANEPV VVKRGHQIVE VKPQGVSKGT AVDKIIRTLL NNGEVPDFLM 780 CVGNDRSDED MFESINKATS SADLPATPEI FACSVGPKAS KANYYVDGCS EVIRLLKGVT 840 AVSSQKDAVR HSHASPKDIL EVVN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 4.0e-150 | 60 | 837 | 817 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
cd03788 | GT1_TPS | 5.0e-171 | 62 | 545 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
PLN02205 | PLN02205 | 0 | 1 | 845 | 851 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 59 | 546 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 59 | 838 | 796 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG24200.1 | 0 | 1 | 864 | 1 | 864 | trehalose 6-phosphate synthase [Zea mays] |
GenBank | ACN34016.1 | 0 | 1 | 864 | 1 | 864 | unknown [Zea mays] |
RefSeq | NP_001061805.1 | 0 | 1 | 863 | 1 | 861 | Os08g0414700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002445486.1 | 0 | 1 | 864 | 1 | 865 | hypothetical protein SORBIDRAFT_07g020270 [Sorghum bicolor] |
RefSeq | XP_002462305.1 | 0 | 1 | 864 | 1 | 861 | hypothetical protein SORBIDRAFT_02g023610 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 117 | 546 | 44 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 771 | 81 | 845 | 0 |
HO779327 | 522 | 92 | 613 | 0 |
HO779327 | 243 | 609 | 851 | 0 |
HO797286 | 479 | 377 | 855 | 0 |
JG952206 | 266 | 489 | 754 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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