y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052142m |
Family | CE10 |
Protein Properties | Length: 356 Molecular Weight: 37428.9 Isoelectric Point: 6.7821 |
Chromosome | Chromosome/Scaffold: 0109832 Start: 345 End: 1412 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 57 | 331 | 0 |
SVQWKEAVYDKAKNLRVRMYRPAAAPAGKLPVLVHFHGGGFCLGSCTWANVHAFCLRLAAEAGAVVLSAGYRLAPEHRLPAAVDDGAGFLRWLREQSANP AAADAWLAEAADFGRVFITGDSAGGTIAHHLAARAGLAAAVTKRGEPGPGPDVDPVTVRGYVLLMPFFGGVRRTRSEVECPAEVLLNLDLFDRFWRLSLP AGATRDHPAANPFGPDSPGLAAADLRPVLVVAGGLDMMRDRAVDYAERLAAMGKPVELAEFAGEPHGFYTLDPGS |
Full Sequence |
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Protein Sequence Length: 356 Download |
MPSMPAVSAA TGAAPPPTKV VVEDIYGFLR VLDDGTVLRS AAEPAFCPTT FPDSHPSVQW 60 KEAVYDKAKN LRVRMYRPAA APAGKLPVLV HFHGGGFCLG SCTWANVHAF CLRLAAEAGA 120 VVLSAGYRLA PEHRLPAAVD DGAGFLRWLR EQSANPAAAD AWLAEAADFG RVFITGDSAG 180 GTIAHHLAAR AGLAAAVTKR GEPGPGPDVD PVTVRGYVLL MPFFGGVRRT RSEVECPAEV 240 LLNLDLFDRF WRLSLPAGAT RDHPAANPFG PDSPGLAAAD LRPVLVVAGG LDMMRDRAVD 300 YAERLAAMGK PVELAEFAGE PHGFYTLDPG SEATGELIGL VRRFVRSCCA AAPKG* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 3.0e-6 | 76 | 181 | 121 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 2.0e-6 | 76 | 183 | 121 | + Carboxylesterase family. | ||
PRK10162 | PRK10162 | 2.0e-11 | 73 | 324 | 256 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 5.0e-34 | 39 | 344 | 310 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-58 | 89 | 325 | 238 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001058950.1 | 0 | 1 | 345 | 1 | 343 | Os07g0162700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132851.1 | 0 | 21 | 346 | 19 | 343 | hypothetical protein LOC100194343 [Zea mays] |
RefSeq | XP_002459376.1 | 0 | 1 | 348 | 1 | 359 | hypothetical protein SORBIDRAFT_02g003600 [Sorghum bicolor] |
RefSeq | XP_002461499.1 | 0 | 21 | 348 | 19 | 339 | hypothetical protein SORBIDRAFT_02g003610 [Sorghum bicolor] |
RefSeq | XP_002461500.1 | 0 | 1 | 348 | 7 | 359 | hypothetical protein SORBIDRAFT_02g003620 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 0 | 10 | 354 | 8 | 336 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 2o7r_A | 0 | 10 | 354 | 8 | 336 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 2.00386e-43 | 62 | 347 | 66 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 2.00386e-43 | 62 | 347 | 66 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 2.00386e-43 | 62 | 347 | 66 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL748147 | 256 | 1 | 256 | 0 |
EC886789 | 246 | 1 | 242 | 0 |
FL886725 | 224 | 97 | 320 | 0 |
CN129143 | 253 | 1 | 246 | 0 |
FL886725 | 27 | 319 | 345 | 0.24 |
Sequence Alignments (This image is cropped. Click for full image.) |
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