Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052269m |
Family | GH47 |
Protein Properties | Length: 183 Molecular Weight: 20845.6 Isoelectric Point: 6.2675 |
Chromosome | Chromosome/Scaffold: 0111936 Start: 360 End: 1598 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 1 | 155 | 0 |
MLALGASGYGPEKSEQIMNLAKELARTCYNFYQTTPTKLAGENYFFHAGQDMSVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIES GYVGLRDVNTGEKDNMMQSFFLAETFKYLYLLFSPPSVISFDEWVFNTEAHPLRI |
Full Sequence |
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Protein Sequence Length: 183 Download |
MLALGASGYG PEKSEQIMNL AKELARTCYN FYQTTPTKLA GENYFFHAGQ DMSVGTSWNI 60 LRPETVESLM YLWRLTGNKT YQDWGWDIFQ AFEKNSRIES GYVGLRDVNT GEKDNMMQSF 120 FLAETFKYLY LLFSPPSVIS FDEWVFNTEA HPLRIVPIHD NKGIGTPARP FGPFGRKQGK 180 PE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 4.0e-66 | 1 | 157 | 165 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-72 | 1 | 155 | 166 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34773.1 | 0 | 1 | 182 | 387 | 565 | unknown [Zea mays] |
EMBL | CAH66776.1 | 0 | 1 | 182 | 387 | 572 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001053800.1 | 0 | 1 | 182 | 387 | 572 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448484.1 | 0 | 1 | 182 | 386 | 564 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
RefSeq | XP_002528166.1 | 0 | 1 | 180 | 340 | 521 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 8e-40 | 1 | 156 | 306 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1x9d_A | 6e-34 | 18 | 155 | 385 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo3_A | 9e-34 | 18 | 155 | 307 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo2_A | 9e-34 | 18 | 155 | 307 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 9e-34 | 18 | 155 | 307 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GD048991 | 183 | 1 | 183 | 0 |
JG910149 | 183 | 1 | 183 | 0 |
JG787895 | 176 | 8 | 183 | 0 |
JG898453 | 176 | 8 | 183 | 0 |
CA174000 | 183 | 1 | 183 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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