| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00052622m |
| Family | GH95 |
| Protein Properties | Length: 250 Molecular Weight: 28081 Isoelectric Point: 5.5135 |
| Chromosome | Chromosome/Scaffold: 0113772 Start: 124 End: 1504 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH95 | 6 | 244 | 0 |
| KNPKHAVWPMGGAWLCTHLWEHYQFSLDKDLLENKAYPLLEGCATFLVDWLIEGQGGYLETNPSTSPEHAFLTPDGQPASVSYSTTMDISIIREVFSAVL LSAEVLGKSDTDLVKNINKALPRLPPVQIARDRTIMEWALDFQDPEVHHRHLSHLFGLYPGHTITLEKNADVCEAAANSLYKRGEDGPGWSTTWKMALWA RLFNSENAYRMVLKLITIVPLGEKVDFEGGLYNNLWTAH | |||
| Full Sequence |
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| Protein Sequence Length: 250 Download |
| SSAFLKNPKH AVWPMGGAWL CTHLWEHYQF SLDKDLLENK AYPLLEGCAT FLVDWLIEGQ 60 GGYLETNPST SPEHAFLTPD GQPASVSYST TMDISIIREV FSAVLLSAEV LGKSDTDLVK 120 NINKALPRLP PVQIARDRTI MEWALDFQDP EVHHRHLSHL FGLYPGHTIT LEKNADVCEA 180 AANSLYKRGE DGPGWSTTWK MALWARLFNS ENAYRMVLKL ITIVPLGEKV DFEGGLYNNL 240 WTAHLIMGLD |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG66022.1 | 0 | 1 | 250 | 457 | 708 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABG66023.1 | 0 | 1 | 250 | 350 | 601 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI22509.1 | 0 | 11 | 250 | 438 | 677 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC79728.1 | 0 | 1 | 250 | 457 | 708 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
| RefSeq | XP_002461732.1 | 0 | 1 | 250 | 521 | 770 | hypothetical protein SORBIDRAFT_02g007180 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 7 | 250 | 440 | 681 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 7 | 250 | 440 | 681 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eac_B | 0.0000000000005 | 19 | 250 | 510 | 767 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eac_A | 0.0000000000005 | 19 | 250 | 510 | 767 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eab_B | 0.0000000000005 | 19 | 250 | 510 | 767 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG890568 | 220 | 31 | 250 | 0 |
| CN010952 | 241 | 6 | 244 | 0 |
| EE620180 | 234 | 11 | 244 | 0 |
| CJ682466 | 238 | 7 | 244 | 0 |
| GO876621 | 237 | 14 | 250 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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