| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00052717m |
| Family | AA1 |
| Protein Properties | Length: 385 Molecular Weight: 41479.7 Isoelectric Point: 10.3122 |
| Chromosome | Chromosome/Scaffold: 0109818 Start: 14 End: 1399 |
| Description | laccase 17 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 32 | 383 | 0 |
| ARTRRYTFNVTMATVTRLCVTKSIPTVNGRFPGPKVVVREGDRLVVQVHNNINSNLTFHWHGVRQLRSGWADGPSYITQCPIRPGRSYAYDFRVVGQRGT LWWHAHFSWLRATLYGPLVILPPRGVPYPFPKPDGGEVPLMLGEWFNADPDAVIRQALRTGGGPNVSDAYTFNGLPGPTYNCSAADTFRLRVQPGRTYML RLVNAALNDELFFAVANHTLTVVAADASYVKPFAATTLVISPGQTMDVLLAAAATPPAPAFAIAVAPYTNTVGTFDNTTAVATLEYAPLQGGAAALRSLP SPALPLYNDTGAVANFSANFRSLASARYPARVPRSVDRKFFFAVGLGADPCR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 385 Download |
| MAGGRRPRCL SPACLFLAAA VALLAMPGLA AARTRRYTFN VTMATVTRLC VTKSIPTVNG 60 RFPGPKVVVR EGDRLVVQVH NNINSNLTFH WHGVRQLRSG WADGPSYITQ CPIRPGRSYA 120 YDFRVVGQRG TLWWHAHFSW LRATLYGPLV ILPPRGVPYP FPKPDGGEVP LMLGEWFNAD 180 PDAVIRQALR TGGGPNVSDA YTFNGLPGPT YNCSAADTFR LRVQPGRTYM LRLVNAALND 240 ELFFAVANHT LTVVAADASY VKPFAATTLV ISPGQTMDVL LAAAATPPAP AFAIAVAPYT 300 NTVGTFDNTT AVATLEYAPL QGGAAALRSL PSPALPLYND TGAVANFSAN FRSLASARYP 360 ARVPRSVDRK FFFAVGLGAD PCRSR |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 2.0e-35 | 167 | 317 | 155 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02604 | PLN02604 | 1.0e-40 | 33 | 281 | 275 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-44 | 34 | 319 | 314 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-52 | 40 | 156 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 0 | 33 | 384 | 352 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001055744.1 | 0 | 43 | 384 | 1 | 343 | Os05g0458300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105874.1 | 0 | 1 | 385 | 1 | 386 | putative laccase [Zea mays] |
| Swiss-Prot | Q0DHL5 | 0 | 43 | 384 | 1 | 343 | LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11 |
| RefSeq | XP_002441216.1 | 0 | 43 | 385 | 1 | 349 | hypothetical protein SORBIDRAFT_09g022460 [Sorghum bicolor] |
| RefSeq | XP_002456622.1 | 0 | 3 | 385 | 10 | 386 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3sqr_A | 7e-40 | 34 | 285 | 67 | 319 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
| PDB | 3v9e_A | 8e-40 | 34 | 285 | 67 | 319 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 1asq_B | 1e-37 | 32 | 373 | 1 | 349 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 1asq_A | 1e-37 | 32 | 373 | 1 | 349 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 1asp_B | 1e-37 | 32 | 373 | 1 | 349 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
