Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052769m |
Family | GH17 |
Protein Properties | Length: 273 Molecular Weight: 28317.1 Isoelectric Point: 4.6918 |
Chromosome | Chromosome/Scaffold: 0113102 Start: 2438 End: 3266 |
Description | beta-1,3-glucanase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 87 | 271 | 0 |
GNIKVSTAVQSGVTQGFPPSQGSFSQGYMGPIAQYLQSTGAPLLCNVYPYFAYTGNEAQIDLSYALFTSSGTVVQDGSNAYQNLFDALVDTFVSALENAG AGNVGVVVSESGWPSAGGDAATPGNAQTYNQNLINHAGQGTPKRPGPIETYIFAMFNEDQKQGAETERHFGLFNPDKSPAYPINF |
Full Sequence |
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Protein Sequence Length: 273 Download |
MRIYFPDTNA LNALSGSNIG VIMDVPNSDL SSLASDPNAA ATTTCRRSRQ SASATSPSAT 60 RSPAGTPTAS SRPCRTSTPL SPTPGSGNIK VSTAVQSGVT QGFPPSQGSF SQGYMGPIAQ 120 YLQSTGAPLL CNVYPYFAYT GNEAQIDLSY ALFTSSGTVV QDGSNAYQNL FDALVDTFVS 180 ALENAGAGNV GVVVSESGWP SAGGDAATPG NAQTYNQNLI NHAGQGTPKR PGPIETYIFA 240 MFNEDQKQGA ETERHFGLFN PDKSPAYPIN FS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 6.0e-89 | 1 | 271 | 284 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABB04443.1 | 0 | 1 | 272 | 59 | 334 | pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
GenBank | ACJ62630.1 | 0 | 1 | 272 | 59 | 334 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
GenBank | ACJ62636.1 | 0 | 1 | 272 | 59 | 334 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
RefSeq | XP_002459073.1 | 0 | 1 | 272 | 61 | 336 | hypothetical protein SORBIDRAFT_03g045450 [Sorghum bicolor] |
RefSeq | XP_002459074.1 | 0 | 1 | 272 | 58 | 332 | hypothetical protein SORBIDRAFT_03g045460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 271 | 30 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 1 | 271 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 271 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 1 | 271 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 1 | 271 | 30 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103698 | 276 | 1 | 273 | 0 |
CA180691 | 187 | 85 | 271 | 0 |
CN136123 | 189 | 85 | 273 | 0 |
CN134410 | 189 | 85 | 273 | 0 |
CN127130 | 189 | 85 | 273 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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