| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00052815m |
| Family | AA2 |
| Protein Properties | Length: 330 Molecular Weight: 35219.2 Isoelectric Point: 8.8832 |
| Chromosome | Chromosome/Scaffold: 0115538 Start: 1883 End: 2965 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA2 | 57 | 312 | 6.86636e-44 |
| REAPIVAYLLRLQFHECAVNGCDGGLLIDGPGTEKTAGPNLSVKGYDLIAAIKAELERRCPGVVSCSDIEILATRDAVALAGGPAYAVRTGRRDRRQSRA SDVKLPAADYTAAQAVAYFSRLGMTAYETVVLLGAHTVGATHCSAIKNSRLYGYGGKPGATDPRMDPATASVYKKWVCPNVSSSDGNAVFLDDQWSALKV DNHYYKNLQLHRGVLPCDQNLYNDGSTRWIIDQLASNSGLFQSAFGQVLVKLSEVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 330 Download |
| MASAARMWAS ALMVVLAVLS LAASGSAQLR YGFYKGKCNA SDVEAVVQGI VKARFAREAP 60 IVAYLLRLQF HECAVNGCDG GLLIDGPGTE KTAGPNLSVK GYDLIAAIKA ELERRCPGVV 120 SCSDIEILAT RDAVALAGGP AYAVRTGRRD RRQSRASDVK LPAADYTAAQ AVAYFSRLGM 180 TAYETVVLLG AHTVGATHCS AIKNSRLYGY GGKPGATDPR MDPATASVYK KWVCPNVSSS 240 DGNAVFLDDQ WSALKVDNHY YKNLQLHRGV LPCDQNLYND GSTRWIIDQL ASNSGLFQSA 300 FGQVLVKLSE VNVLTGAQGE IRKVCNKFN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 0.002 | 262 | 293 | 32 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 2.0e-13 | 59 | 310 | 270 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 8.0e-54 | 47 | 194 | 150 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-74 | 30 | 329 | 305 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 3.0e-133 | 28 | 328 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ08613.1 | 0 | 27 | 329 | 27 | 328 | hypothetical protein OsI_30884 [Oryza sativa Indica Group] |
| RefSeq | NP_001062872.1 | 0 | 27 | 329 | 27 | 328 | Os09g0323700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001062873.1 | 0 | 27 | 329 | 28 | 331 | Os09g0323900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002464909.1 | 0 | 27 | 329 | 28 | 330 | hypothetical protein SORBIDRAFT_01g028640 [Sorghum bicolor] |
| RefSeq | XP_002467467.1 | 0 | 28 | 329 | 30 | 331 | hypothetical protein SORBIDRAFT_01g028610 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 28 | 329 | 2 | 304 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
| PDB | 1pa2_A | 0 | 28 | 329 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1sch_B | 0 | 28 | 329 | 1 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 28 | 329 | 1 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 4a5g_B | 0 | 29 | 329 | 4 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
