Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052831m |
Family | GH9 |
Protein Properties | Length: 529 Molecular Weight: 54902.4 Isoelectric Point: 6.6382 |
Chromosome | Chromosome/Scaffold: 0112378 Start: 19 End: 2108 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 32 | 520 | 0 |
NYADALDKALLFFETQRSGKLPPGQRAAWRGDSGLSDGAAEGADLVGGYYDAGDNVKFGLPMAFTVTMLSWSVAEFGDAMVRAGGGHLESARAAVRWGAD YLLKAAAAAPGALYVQVGDPYQDHRCWERPEDMDTPRGVYKVTPDRPGSDVAGETAAALAAASIVFRACDPAYSSKLLQTARKVFDFADRYRGSYSDSLG SVACPFYCSYSGYNDELLWAAAWLHRATAAGKGGGGCGCGNNSSADAYLSYIYSNGHTLGAEQDDFTFSWDDKRSGTKVLLANWFLQLHGGGAGGKTSPA AAALQLYKAHADSYVCSLVPGAAGFQSSQYTPGGLLFKEGDSNMQYVTSAAFLLLAYAKHLAGAGAVASCGRAAVPPAALAAVARRQVDYILGANPAGMS YMVGFGGGRFPRRVHHRGASMPAVRDHPARIGCDEGFRYLHSPEPDANVLVGAVVGGPDGGDGYTDSRDNYAQAEPSTYTNAPLVGALA |
Full Sequence |
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Protein Sequence Length: 529 Download |
MAAVRASDKA AASLAVVVVC LMAGGSAAAA FNYADALDKA LLFFETQRSG KLPPGQRAAW 60 RGDSGLSDGA AEGADLVGGY YDAGDNVKFG LPMAFTVTML SWSVAEFGDA MVRAGGGHLE 120 SARAAVRWGA DYLLKAAAAA PGALYVQVGD PYQDHRCWER PEDMDTPRGV YKVTPDRPGS 180 DVAGETAAAL AAASIVFRAC DPAYSSKLLQ TARKVFDFAD RYRGSYSDSL GSVACPFYCS 240 YSGYNDELLW AAAWLHRATA AGKGGGGCGC GNNSSADAYL SYIYSNGHTL GAEQDDFTFS 300 WDDKRSGTKV LLANWFLQLH GGGAGGKTSP AAAALQLYKA HADSYVCSLV PGAAGFQSSQ 360 YTPGGLLFKE GDSNMQYVTS AAFLLLAYAK HLAGAGAVAS CGRAAVPPAA LAAVARRQVD 420 YILGANPAGM SYMVGFGGGR FPRRVHHRGA SMPAVRDHPA RIGCDEGFRY LHSPEPDANV 480 LVGAVVGGPD GGDGYTDSRD NYAQAEPSTY TNAPLVGALA FLAGGRGH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03009 | PLN03009 | 5.0e-123 | 41 | 527 | 489 | + cellulase | ||
PLN02613 | PLN02613 | 5.0e-123 | 41 | 524 | 486 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-123 | 41 | 520 | 483 | + Glycosyl hydrolase family 9. | ||
PLN02308 | PLN02308 | 2.0e-139 | 41 | 523 | 483 | + endoglucanase | ||
PLN02266 | PLN02266 | 2.0e-159 | 41 | 528 | 493 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05384.1 | 0 | 26 | 524 | 29 | 501 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ41304.1 | 0 | 26 | 524 | 29 | 501 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
RefSeq | NP_001045737.1 | 0 | 9 | 524 | 3 | 496 | Os02g0123700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060848.1 | 0 | 26 | 524 | 48 | 520 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002451429.1 | 0 | 5 | 526 | 6 | 512 | hypothetical protein SORBIDRAFT_04g001960 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 30 | 522 | 2 | 428 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1ksc_A | 0 | 30 | 522 | 2 | 428 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1ks8_A | 0 | 30 | 522 | 2 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 30 | 527 | 3 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 30 | 527 | 3 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |