Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00053033m |
Family | GH100 |
Protein Properties | Length: 400 Molecular Weight: 45750.6 Isoelectric Point: 4.8686 |
Chromosome | Chromosome/Scaffold: 011567 Start: 3735 End: 7724 |
Description | alkaline/neutral invertase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 2 | 207 | 0 |
YDQVFIRDFVPSGVAFLLKGEHDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRVIPLDGDDDATEEVLDPDFGEAAIGRVAPVDSDFTMIFRVV DLWWIILLRAYGKCSGDLSVQERIDVQTGIKMIWKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLTPEDGPDDLIRALNK RLKEYS | |||
GH100 | 234 | 378 | 0 |
VSSLATDHQSHAILDLIEAKWSDLVAEMPMKICYPALEDEEWKFTTGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRLEIAERAVEVSERRIARDKWP EYYDTKRERLIGEQSRLFQTWSIAGFLVAKLLLETDEEILNALSL |
Full Sequence |
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Protein Sequence Length: 400 Download |
PYDQVFIRDF VPSGVAFLLK GEHDIVRNFI LHTLQLQSWE KTMDCHSPGQ GLMPASFKVR 60 VIPLDGDDDA TEEVLDPDFG EAAIGRVAPV DSDFTMIFRV VDLWWIILLR AYGKCSGDLS 120 VQERIDVQTG IKMIWKLCLA DGFDMFPTLL VTDGSCMIDR RMGIHGHPLE IQALFYSALL 180 CAREMLTPED GPDDLIRALN KRLKEYSYDA VNKFNLYPDQ IPSWLVEWIP PKGVSSLATD 240 HQSHAILDLI EAKWSDLVAE MPMKICYPAL EDEEWKFTTG SDPKNTPWSY HNGGSWPTLL 300 WQLTVACIKM NRLEIAERAV EVSERRIARD KWPEYYDTKR ERLIGEQSRL FQTWSIAGFL 360 VAKLLLETDE EILNALSLMA DEPSPRRRRR KQAPKTYIV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 1.0e-6 | 91 | 374 | 318 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN02973 | PLN02973 | 9.0e-146 | 2 | 367 | 417 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 9.0e-149 | 2 | 382 | 432 | + beta-fructofuranosidase | ||
PLN02703 | PLN02703 | 0 | 2 | 399 | 461 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 2 | 367 | 417 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84899.1 | 0 | 2 | 399 | 157 | 601 | unknown [Zea mays] |
GenBank | EAY94016.1 | 0 | 2 | 399 | 123 | 574 | hypothetical protein OsI_15793 [Oryza sativa Indica Group] |
RefSeq | NP_001052726.1 | 0 | 2 | 399 | 123 | 574 | Os04g0409900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142296.1 | 0 | 2 | 399 | 157 | 601 | hypothetical protein LOC100274465 [Zea mays] |
RefSeq | XP_002452195.1 | 0 | 2 | 399 | 159 | 603 | hypothetical protein SORBIDRAFT_04g021550 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 462 | 2 | 400 | 0 |
HO779905 | 419 | 45 | 400 | 0 |
GO845848 | 314 | 2 | 264 | 0 |
HO466454 | 442 | 2 | 381 | 0 |
GO845848 | 20 | 264 | 283 | 6.3 |
Sequence Alignments (This image is cropped. Click for full image.) |
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