Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00053047m |
Family | GT37 |
Protein Properties | Length: 400 Molecular Weight: 44629 Isoelectric Point: 7.0531 |
Chromosome | Chromosome/Scaffold: 0111562 Start: 1036 End: 2235 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 14 | 370 | 0 |
TNTFLYALLTDRVLLVHAPHEFDGLFCEPFPGSSWALPAGFPITDFAGVFTMGSPTSYKNMRQAGAVSGDHRNVTADSLPAFVFLDLIQSFTDAAFCESD QRVLAKFNWVVVKSDVYFAAMFFLMPAYERELARLFPEKEAVFHHLARYLFHPSDDVWAIVRRYYGAYLARADERVGLQVRVFPEMPVPFENMYGQILRC SEQEPGLLPKVARKGGAAANHSSAAVASSGSRSNKLTSILVTSLFSDYYERIRGVYYANPTETGEFVEVHQPSHEREQRTEARAHNQRALAEMYLLSFCD RIVTTAVSTFGYVAHGLAGVRPWVLLRPPTPEAPVDPACVRSRTVEPCLQAPPRRMC |
Full Sequence |
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Protein Sequence Length: 400 Download |
MTAHQFRLVI TVHTNTFLYA LLTDRVLLVH APHEFDGLFC EPFPGSSWAL PAGFPITDFA 60 GVFTMGSPTS YKNMRQAGAV SGDHRNVTAD SLPAFVFLDL IQSFTDAAFC ESDQRVLAKF 120 NWVVVKSDVY FAAMFFLMPA YERELARLFP EKEAVFHHLA RYLFHPSDDV WAIVRRYYGA 180 YLARADERVG LQVRVFPEMP VPFENMYGQI LRCSEQEPGL LPKVARKGGA AANHSSAAVA 240 SSGSRSNKLT SILVTSLFSD YYERIRGVYY ANPTETGEFV EVHQPSHERE QRTEARAHNQ 300 RALAEMYLLS FCDRIVTTAV STFGYVAHGL AGVRPWVLLR PPTPEAPVDP ACVRSRTVEP 360 CLQAPPRRMC GVAEGSDIGA LVPYARHCED EHKGLKLFP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.001 | 285 | 330 | 46 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 16 | 370 | 358 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY87635.1 | 0 | 15 | 398 | 204 | 579 | hypothetical protein OsI_09045 [Oryza sativa Indica Group] |
GenBank | EAZ24719.1 | 0 | 15 | 398 | 131 | 506 | hypothetical protein OsJ_08489 [Oryza sativa Japonica Group] |
RefSeq | NP_001048211.1 | 0 | 15 | 398 | 6 | 381 | Os02g0763800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001159219.1 | 0 | 15 | 398 | 6 | 385 | hypothetical protein LOC100304305 [Zea mays] |
RefSeq | XP_002452875.1 | 0 | 15 | 399 | 209 | 593 | hypothetical protein SORBIDRAFT_04g034080 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT751820 | 315 | 86 | 397 | 0 |
CV288405 | 324 | 50 | 370 | 0 |
DR939301 | 276 | 122 | 397 | 0 |
GT816013 | 246 | 124 | 367 | 0 |
GT043638 | 318 | 9 | 323 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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