| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00053056m |
| Family | AA1 |
| Protein Properties | Length: 566 Molecular Weight: 62651.7 Isoelectric Point: 9.0119 |
| Chromosome | Chromosome/Scaffold: 0111894 Start: 105 End: 2190 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 22 | 544 | 0 |
| AAIVEHTFDVGNFSISQLCRPATVITAVNGQLPGPTIHAHEGDTVAVHVLNNSPYNLTIHWYMYQQMNHRGTQWADGPEMVTQCPICPGGRYTYRYNVTG QEGTLWWHAHSSMLRATVHGAIVIRPRNGDHGYPFPKPHKEEIIMLEIIMLYVGEWWNRNVFDLARKAFLAGTLVDPADAYTINGMPGDLHRCSSSSSRK PRTFKLKVQSNRTYLLRIINAAVNTPMFFKIAGHSFTVVGADASYTTPYETDVVVVSPGQTVDALMVAGERASQRYYMVASPYNSAHPDVPFREGAATAV VEYAAAGAPRTRARRRPLFGPMPPFNDTATAHRFFTSLTALLRPGHPTVPLAVDTRMFVTVGLGLAACRPEQTRCMQQGVAASMNNASFELPTAMSLLEA HFRNVTAGVYTRDFPDQPPLEFNYAKPPSSMDATTAKSTKVRTVRYNATVEVVLQNTGLLARESHPMHLHGHNFFVLAQGFGNFRRDAAVARYNLVNPQE RNTLAVPPGGWAVIRFVANNPGT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MARSCSWLLL LALALVARCG RAAIVEHTFD VGNFSISQLC RPATVITAVN GQLPGPTIHA 60 HEGDTVAVHV LNNSPYNLTI HWYMYQQMNH RGTQWADGPE MVTQCPICPG GRYTYRYNVT 120 GQEGTLWWHA HSSMLRATVH GAIVIRPRNG DHGYPFPKPH KEEIIMLEII MLYVGEWWNR 180 NVFDLARKAF LAGTLVDPAD AYTINGMPGD LHRCSSSSSR KPRTFKLKVQ SNRTYLLRII 240 NAAVNTPMFF KIAGHSFTVV GADASYTTPY ETDVVVVSPG QTVDALMVAG ERASQRYYMV 300 ASPYNSAHPD VPFREGAATA VVEYAAAGAP RTRARRRPLF GPMPPFNDTA TAHRFFTSLT 360 ALLRPGHPTV PLAVDTRMFV TVGLGLAACR PEQTRCMQQG VAASMNNASF ELPTAMSLLE 420 AHFRNVTAGV YTRDFPDQPP LEFNYAKPPS SMDATTAKST KVRTVRYNAT VEVVLQNTGL 480 LARESHPMHL HGHNFFVLAQ GFGNFRRDAA VARYNLVNPQ ERNTLAVPPG GWAVIRFVAN 540 NPGTVMDDHD TLTCLCWFDL FLKGFV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 4.0e-43 | 36 | 150 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 4.0e-54 | 22 | 543 | 549 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-56 | 40 | 544 | 526 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 7.0e-72 | 24 | 543 | 542 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 22 | 543 | 526 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 13 | 543 | 94 | 615 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 26 | 543 | 26 | 534 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE62822.1 | 0 | 26 | 543 | 26 | 501 | hypothetical protein OsJ_17625 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 26 | 543 | 26 | 534 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 3 | 543 | 5 | 534 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 44 | 543 | 22 | 501 | D Chain D, Crystal Structure Of Xv19 Tcr In Complex With Cd1d-Sulfatide C24:1 |
| PDB | 1asq_A | 0 | 44 | 543 | 22 | 501 | D Chain D, Crystal Structure Of Xv19 Tcr In Complex With Cd1d-Sulfatide C24:1 |
| PDB | 1asp_B | 0 | 44 | 543 | 22 | 501 | D Chain D, Crystal Structure Of Xv19 Tcr In Complex With Cd1d-Sulfatide C24:1 |
| PDB | 1asp_A | 0 | 44 | 543 | 22 | 501 | D Chain D, Crystal Structure Of Xv19 Tcr In Complex With Cd1d-Sulfatide C24:1 |
| PDB | 1aso_B | 0 | 44 | 543 | 22 | 501 | D Chain D, Crystal Structure Of Xv19 Tcr In Complex With Cd1d-Sulfatide C24:1 |
