Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00053135m |
Family | GH17 |
Protein Properties | Length: 422 Molecular Weight: 43572.6 Isoelectric Point: 8.4042 |
Chromosome | Chromosome/Scaffold: 011248 Start: 9286 End: 10910 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 344 | 0 |
LGINYGQVADNLPPPQAAAVLLRALNATRVKLYDADSRVLSAFAGSGADFTVSLPDRLVPRLASDPSAASAWVRANILPHLPATSITAVTVGNEVLTGTD ATMLRSLLPAMQALHAALAACNLTSRVAVTTAHSLAVLSSSFPPSAAAFRRDVLPYMSPLLGFLAKTGAPFLVNAYPYFAYKADPDRVDLSYVLFEPNAG VPDAATGLRYGNMLHAQVDAVRAAICRANYGKALEIRVSETGWPSQGDEDEAGATPENAARYNGNLMRLVAQGKGTPAAPGEPLQVYLFALFNEDQKPGP ASERHYGLFKPDGTPAYDV |
Full Sequence |
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Protein Sequence Length: 422 Download |
MALRLVLAAA FAVLAPDLAA AGAPALGINY GQVADNLPPP QAAAVLLRAL NATRVKLYDA 60 DSRVLSAFAG SGADFTVSLP DRLVPRLASD PSAASAWVRA NILPHLPATS ITAVTVGNEV 120 LTGTDATMLR SLLPAMQALH AALAACNLTS RVAVTTAHSL AVLSSSFPPS AAAFRRDVLP 180 YMSPLLGFLA KTGAPFLVNA YPYFAYKADP DRVDLSYVLF EPNAGVPDAA TGLRYGNMLH 240 AQVDAVRAAI CRANYGKALE IRVSETGWPS QGDEDEAGAT PENAARYNGN LMRLVAQGKG 300 TPAAPGEPLQ VYLFALFNED QKPGPASERH YGLFKPDGTP AYDVGVRAPT ISGWKGSGNN 360 GTGGGAGLVV SQGPGGADGV GPGTGYYTVS AAASKVKRRR RCVESLVAAA VLAMESGLWW 420 S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 263 | 337 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-80 | 28 | 344 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ06269.1 | 0 | 29 | 418 | 29 | 421 | putative beta-1,3-glucanase [Pennisetum glaucum] |
DDBJ | BAD67672.1 | 0 | 29 | 421 | 30 | 423 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
DDBJ | BAD67673.1 | 0 | 29 | 396 | 30 | 399 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001056696.1 | 0 | 29 | 421 | 56 | 449 | Os06g0131500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437759.1 | 0 | 24 | 405 | 30 | 416 | hypothetical protein SORBIDRAFT_10g002130 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 346 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 346 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 346 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 346 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |