Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00053205m |
Family | CE8 |
Protein Properties | Length: 366 Molecular Weight: 39685.9 Isoelectric Point: 9.8646 |
Chromosome | Chromosome/Scaffold: 0110452 Start: 102 End: 1556 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 97 | 362 | 0 |
VVAQDGIGRYRTVSEAVARAPIHSKKKYVIHVKRGIYHENVEVRKKKTNIMFVGEGMGETVISGSRSFSGGWTTFRSATIDNKLTSHPMWPSVAGAGFVA RDLTIRNTAGPAAHQAVALRVDSDRSAFFRSLRQFYRNCRDSGTVDFVFGNVVAVLQRTLVATLSPGQAGSITAQGRRDPNQNTGFVFHGCVVDARHPTF LVRPWKPISRVVARGWLEWAATSSGERSAALATLFYRECGNYGPDADVAGRVKWPGYHVIADAAVA |
Full Sequence |
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Protein Sequence Length: 366 Download |
MAVRDCVELL GYSVDELGWA LDAMAKTDNG MEEPNASGAR GGGAAGALGN QDTCLEDFHG 60 TDGHLLRRVE VAVAQLSQLV SNLLAIHKRM PTRVDNVVAQ DGIGRYRTVS EAVARAPIHS 120 KKKYVIHVKR GIYHENVEVR KKKTNIMFVG EGMGETVISG SRSFSGGWTT FRSATIDNKL 180 TSHPMWPSVA GAGFVARDLT IRNTAGPAAH QAVALRVDSD RSAFFRSLRQ FYRNCRDSGT 240 VDFVFGNVVA VLQRTLVATL SPGQAGSITA QGRRDPNQNT GFVFHGCVVD ARHPTFLVRP 300 WKPISRVVAR GWLEWAATSS GERSAALATL FYRECGNYGP DADVAGRVKW PGYHVIADAA 360 VAGRFT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 1.0e-91 | 2 | 366 | 444 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-94 | 2 | 366 | 429 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 8.0e-109 | 2 | 366 | 442 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 1.0e-128 | 1 | 366 | 429 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-131 | 95 | 366 | 307 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001042618.1 | 1e-23 | 1 | 90 | 121 | 228 | Os01g0254300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001042618.1 | 0 | 93 | 366 | 302 | 586 | Os01g0254300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130602.1 | 0 | 1 | 366 | 126 | 570 | hypothetical protein LOC100191701 [Zea mays] |
RefSeq | XP_002457581.1 | 0 | 1 | 366 | 125 | 572 | hypothetical protein SORBIDRAFT_03g009790 [Sorghum bicolor] |
RefSeq | XP_002512462.1 | 0 | 1 | 366 | 100 | 511 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 97 | 366 | 6 | 293 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 97 | 366 | 10 | 297 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 0.000000008 | 106 | 305 | 18 | 249 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000008 | 106 | 305 | 18 | 249 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2nt9_B | 0.000000009 | 106 | 305 | 18 | 249 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CA182007 | 236 | 130 | 339 | 0 |
DY801979 | 299 | 94 | 366 | 0 |
EE607719 | 275 | 94 | 342 | 0 |
DY829415 | 271 | 122 | 366 | 0 |
EY254345 | 190 | 134 | 308 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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