| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00053329m |
| Family | GH9 |
| Protein Properties | Length: 468 Molecular Weight: 50932.3 Isoelectric Point: 5.6138 |
| Chromosome | Chromosome/Scaffold: 0109238 Start: 40 End: 1744 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 31 | 431 | 0 |
| DYAGAFDKCLQFFEAQRSGKLPADHRVKWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGFPMAYAVTMLSWGVLEFDKEMVAGAANNLQRALDAIRWGTN YFIKAHTEPNGLWVQVGDGDSDHLCWERAEDMSTPRTAFQIDINHPGSDVAGETAAALAAAAKAFRPYDSMYADLLLLHAKQLFTFADTFRGRYDDSLQG AKKFYPSESGYQDELLWAAAWLYEATGDEGYLRYVSQNAEAFGGTGWSVLEFSWDNKYAGLQVLLSKVLLEGGAGAGADTLRQFQAKAEFFLCACLQKNN GHNIKLTPGGLLYVDDWNNMQYVSSSTFLLTVYADYLAVSRGALKCPDGEVKPAEMIRFAKAQVDYVLGKNPKGMSYMVGYGSYFPTHVHHRGASIPSVS D | |||
| Full Sequence |
|---|
| Protein Sequence Length: 468 Download |
| MARLMTTGTS AALLMGAAFL LLAAADASPY DYAGAFDKCL QFFEAQRSGK LPADHRVKWR 60 GDSALTDGFS QGVDLVGGYY DSGDHVKFGF PMAYAVTMLS WGVLEFDKEM VAGAANNLQR 120 ALDAIRWGTN YFIKAHTEPN GLWVQVGDGD SDHLCWERAE DMSTPRTAFQ IDINHPGSDV 180 AGETAAALAA AAKAFRPYDS MYADLLLLHA KQLFTFADTF RGRYDDSLQG AKKFYPSESG 240 YQDELLWAAA WLYEATGDEG YLRYVSQNAE AFGGTGWSVL EFSWDNKYAG LQVLLSKVLL 300 EGGAGAGADT LRQFQAKAEF FLCACLQKNN GHNIKLTPGG LLYVDDWNNM QYVSSSTFLL 360 TVYADYLAVS RGALKCPDGE VKPAEMIRFA KAQVDYVLGK NPKGMSYMVG YGSYFPTHVH 420 HRGASIPSVS DVTSAVGCMD GFDSTTTARA RPQRRSTAPI VGGRATTA |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-160 | 31 | 425 | 397 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 4.0e-165 | 31 | 443 | 413 | + endoglucanase | ||
| PLN02420 | PLN02420 | 3.0e-178 | 30 | 444 | 416 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 28 | 444 | 417 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 30 | 463 | 434 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2XYW8 | 0 | 26 | 463 | 33 | 470 | GUN13_ORYSI RecName: Full=Endoglucanase 13; AltName: Full=Endo-1,4-beta glucanase 13; AltName: Full=OsGLU6; Flags: Precursor |
| EMBL | CBG76271.1 | 0 | 26 | 463 | 28 | 465 | OO_Ba0005L10-OO_Ba0081K17.22 [Oryza officinalis] |
| GenBank | EAZ32394.1 | 0 | 30 | 463 | 38 | 471 | hypothetical protein OsJ_16605 [Oryza sativa Japonica Group] |
| RefSeq | NP_001054243.1 | 0 | 26 | 463 | 33 | 470 | Os04g0674800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448763.1 | 0 | 1 | 463 | 1 | 469 | hypothetical protein SORBIDRAFT_06g032760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 30 | 427 | 3 | 366 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 0 | 30 | 427 | 3 | 366 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 0 | 30 | 427 | 3 | 366 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 30 | 424 | 4 | 380 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 30 | 424 | 4 | 380 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
