| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00053527m |
| Family | GH95 |
| Protein Properties | Length: 441 Molecular Weight: 48027.8 Isoelectric Point: 5.129 |
| Chromosome | Chromosome/Scaffold: 0115152 Start: 168 End: 2698 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH95 | 38 | 439 | 0 |
| EARPLKVVFASPATYFTDAAPIGNGRLGAMVWGGVESERLQLNHDTLWTGGPGNYTNPKAPAVLSNVRSLVYNGKYPEATSAAYDLSGDQTQVYQPLGDI NMIFGKHIKHTNYKRELDLHTATVNVTYSVDEVLYSREHFASNPHQVIVTKISANKPGNISFTVSLTTPLDHKILVTDANEIIMEGSCPGERPQNDNSAS DHPIGIKFCAILYLQTNGANSKVEVIKDKMLKLDGADSVVLILAAGTSFEGPFIKPSESKLDPKVSAFTTLSVARSMSYSQLKAYHMDDYQSLFHRVSLQ LSQGSNYQLADNRIGQSAQAGSQDATVSNYAFPIADCTRSAVLNDSVKPTVDRIITFKDNEDPSLVELLFQFGRYLLISCSRPGTQISNLQGIWSNDPSP PW | |||
| Full Sequence |
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| Protein Sequence Length: 441 Download |
| MDCDRDCGSD AGAEWVWVRR PVEAEAAAAA AGWPADEEAR PLKVVFASPA TYFTDAAPIG 60 NGRLGAMVWG GVESERLQLN HDTLWTGGPG NYTNPKAPAV LSNVRSLVYN GKYPEATSAA 120 YDLSGDQTQV YQPLGDINMI FGKHIKHTNY KRELDLHTAT VNVTYSVDEV LYSREHFASN 180 PHQVIVTKIS ANKPGNISFT VSLTTPLDHK ILVTDANEII MEGSCPGERP QNDNSASDHP 240 IGIKFCAILY LQTNGANSKV EVIKDKMLKL DGADSVVLIL AAGTSFEGPF IKPSESKLDP 300 KVSAFTTLSV ARSMSYSQLK AYHMDDYQSL FHRVSLQLSQ GSNYQLADNR IGQSAQAGSQ 360 DATVSNYAFP IADCTRSAVL NDSVKPTVDR IITFKDNEDP SLVELLFQFG RYLLISCSRP 420 GTQISNLQGI WSNDPSPPWE * |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK98716.1 | 0 | 10 | 440 | 2 | 433 | AC090483_6 Hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ABG66022.1 | 0 | 12 | 440 | 3 | 393 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC66760.1 | 0 | 10 | 440 | 2 | 433 | hypothetical protein OsI_33136 [Oryza sativa Indica Group] |
| GenBank | EEC79728.1 | 0 | 12 | 440 | 3 | 393 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
| RefSeq | NP_001064381.1 | 0 | 10 | 440 | 2 | 433 | Os10g0339600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 42 | 439 | 3 | 365 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 42 | 439 | 3 | 365 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eae_A | 3e-36 | 4 | 432 | 10 | 401 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2ead_B | 4e-36 | 4 | 432 | 11 | 402 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 2ead_A | 4e-36 | 4 | 432 | 11 | 402 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL806432 | 266 | 175 | 440 | 0 |
| FL867777 | 261 | 119 | 379 | 0 |
| FL747263 | 252 | 40 | 291 | 0 |
| FE646379 | 220 | 40 | 259 | 0 |
| FE646379 | 19 | 253 | 271 | 0.49 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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