CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00053585m
FamilyGT8
Protein PropertiesLength: 680 Molecular Weight: 77712.9 Isoelectric Point: 9.6068
ChromosomeChromosome/Scaffold: 011200 Start: 5186 End: 9953
Descriptiongalacturonosyltransferase 1
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT83376520
  CLSMRLTIDYYLLSPEKRKFPNSENLENPELYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWL
  NSSYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESF
  HRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLEEWKRKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDN
  AAVIHYNGNMKPWLEI
Full Sequence
Protein Sequence     Length: 680     Download
METTSHFLTE NSLNRNKKNS KVLYSVRELS DARTAPTATC VNGPLSVTEG RSSASTECTG    60
RHHSSPAPRK PARALPSHIQ SVPRSDPSRP AMAIRAGRSA LVALAFLLAA SPCLQARVDQ    120
LYHGRQVSDW SRQINFELQN LSSSQKDGRH LLASPKEITH RKLRARTGVR KKMEVVQQDD    180
EALVKLENTG IERSKAVDSA VLGKYSIWRR ENENEKADSR VRQMRDQMIM ARIYSVLAKS    240
RDKLDLYQEL LARLKESQRS LGEATADAEL PKSALERMKA MAQVLSKARD LLYDCKAITE    300
RLRVMLLSAD EQVRSLKKQS TFLSQLAAKT IPNGIHCLSM RLTIDYYLLS PEKRKFPNSE    360
NLENPELYHY ALFSDNVLAA SVVVNSTIMN AKEPEKHVFH LVTDKLNFGA MNMWFLLNPP    420
GDATIHVENV DDFKWLNSSY CPVLKQLESA AMKEYYFKAD RPKTLSAGSS NLKYRNPKYL    480
SMLNHLRFYL PQVYPKLNKI LFLDDDIVVQ RDLTGLWEVD LNGNVNGAVE TCGESFHRFD    540
KYLNFSNPNI SQNFDPNACG WAYGMNMFDL EEWKRKDITG IYHKWQNMNE NRLLWKLGTL    600
PPGLLTFYKL THPLDKSWHV LGLGYNPTIE RSEIDNAAVI HYNGNMKPWL EIAMTKYRPY    660
WTKYINYEHP YIHGCKISQ* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN02910PLN029100137679543+
PLN02829PLN028290178677504+
PLN02742PLN027420217678468+
PLN02523PLN025230218675479+
PLN02718PLN027180218677463+
Gene Ontology
GO TermDescription
GO:0016757transferase activity, transferring glycosyl groups
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACN33451.10926791590unknown [Zea mays]
GenBankEEC81302.10966792588hypothetical protein OsI_24438 [Oryza sativa Indica Group]
GenBankEEC84934.10173679189695hypothetical protein OsI_32147 [Oryza sativa Indica Group]
RefSeqNP_001130678.10926791588hypothetical protein LOC100191781 [Zea mays]
RefSeqXP_002466644.10926791588hypothetical protein SORBIDRAFT_01g011560 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1ga8_A0.000247664975252A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase
PDB1g9r_A0.000247664975252A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose
PDB1ss9_A0.000447664975252A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc
Metabolic Pathways
Pathway NameReactionECProtein Name
homogalacturonan biosynthesis2.4.1.43-RXNEC-2.4.1.43polygalacturonate 4-α-galacturonosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GT0421593243566790
GO8426483283536800
GO8735663143026150
GT0339653143316440
GO873566316076370.004
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00994.1Aquca_006_00354.1Aquca_013_00482.2Aquca_013_00482.1Aquca_006_00354.3
Aquca_006_00354.2Aquca_005_00362.2Aquca_005_00362.1Aquca_015_00356.1Aquca_002_00928.1
Aquca_008_00014.2Aquca_008_00014.1Aquca_015_00356.2Aquca_002_00774.1Aquca_005_00444.1
Aquca_017_00613.2Aquca_017_00613.1Aquca_013_00482.3
Arabidopsis lyrata497166477468486584912279478777
312807322297480918477431326001
495550470701902046907363
Arabidopsis thalianaAT3G25140.1AT3G02350.1AT3G61130.1AT4G38270.2AT4G38270.1
AT5G47780.1AT1G18580.1AT2G46480.1AT2G20810.1AT3G01040.2
AT3G01040.1AT5G15470.1AT5G54690.1AT1G06780.2AT1G06780.1
AT2G30575.1AT3G58790.1
Brachypodium distachyonBradi3g43810.1Bradi1g12180.1Bradi4g36050.1Bradi1g29784.1Bradi3g20550.2
Bradi3g20550.1Bradi4g33280.1Bradi3g39270.1Bradi5g23250.1Bradi1g45210.1
Bradi1g60010.1Bradi4g03670.1Bradi4g14910.1Bradi1g70290.1Bradi1g70290.2
Bradi2g48710.1Bradi3g59370.1
Brassica rapaBra015104Bra013229Bra021466Bra001040Bra007573
Bra033560Bra014349Bra024910Bra014453Bra004535
Bra025667Bra016552Bra015239Bra006301Bra039149
Bra022739Bra002963Bra015529Bra031537Bra001025
Bra023519Bra008696Bra007420Bra003357Bra029010
Bra021650
Carica papayaevm.model.supercontig_43.115evm.model.supercontig_70.2evm.model.supercontig_20.219evm.model.supercontig_27.191evm.model.supercontig_18.164
evm.model.supercontig_3.244evm.model.supercontig_9.231evm.model.supercontig_97.76evm.model.supercontig_52.137evm.model.supercontig_50.74
evm.model.supercontig_14.153
Capsella rubellaCarubv10013367mCarubv10013365mCarubv10016785mCarubv10006353mCarubv10026096m
Carubv10025515mCarubv10008800mCarubv10013424mCarubv10016906mCarubv10016905m
Carubv10013435mCarubv10027804mCarubv10000686mCarubv10008650mCarubv10025075m
Carubv10016997m
Citrus clementinaCiclev10011396mCiclev10027946mCiclev10019146mCiclev10014562mCiclev10019659m
Ciclev10014426mCiclev10020276mCiclev10014869mCiclev10011444mCiclev10019396m
Ciclev10008578mCiclev10007975mCiclev10008973mCiclev10008241mCiclev10031800m
Ciclev10031200mCiclev10032150mCiclev10032135m
Citrus sinensisorange1.1g008561morange1.1g011612morange1.1g040435morange1.1g005684morange1.1g005683m
orange1.1g007832morange1.1g006413morange1.1g006215morange1.1g011023morange1.1g009436m
orange1.1g005035morange1.1g009572morange1.1g008157morange1.1g007412morange1.1g015279m
orange1.1g009348morange1.1g011913morange1.1g007588morange1.1g011974morange1.1g007529m
orange1.1g012480morange1.1g010187morange1.1g009468morange1.1g012380morange1.1g008524m
Cucumis sativusCucsa.078020.1Cucsa.362990.3Cucsa.362990.2Cucsa.362990.1Cucsa.099660.1
Cucsa.044420.2Cucsa.044420.1Cucsa.180730.1Cucsa.257890.1Cucsa.007320.1
Cucsa.198610.1Cucsa.300840.1Cucsa.174740.1Cucsa.157950.3Cucsa.157950.2
Cucsa.157950.1Cucsa.059680.1Cucsa.388660.2Cucsa.388660.1Cucsa.139610.2
Cucsa.139610.1
Eucalyptus grandisEucgr.K02133.1Eucgr.I02091.1Eucgr.E01335.2Eucgr.E01335.1Eucgr.D00963.4
Eucgr.D00963.3Eucgr.D00963.2Eucgr.D00963.1Eucgr.B00636.1Eucgr.J01378.1
Eucgr.B01494.1Eucgr.I01979.1Eucgr.F00995.2Eucgr.F00995.1Eucgr.A01962.1
Fragaria vescamrna17381.1-v1.0-hybridmrna19436.1-v1.0-hybridmrna04185.1-v1.0-hybridmrna19862.1-v1.0-hybridmrna17317.1-v1.0-hybrid
mrna10269.1-v1.0-hybridmrna26124.1-v1.0-hybridmrna04333.1-v1.0-hybridmrna08199.1-v1.0-hybridmrna03305.1-v1.0-hybrid
mrna24493.1-v1.0-hybrid
Glycine maxGlyma18g33210.1Glyma08g46210.1Glyma13g06990.1Glyma19g05060.1Glyma07g08910.2
Glyma03g02250.2Glyma18g45750.2Glyma09g40260.1Glyma05g09200.2Glyma08g46210.2
Glyma17g00782.2Glyma17g00782.1Glyma07g40011.1Glyma09g01980.1Glyma15g12900.1
Glyma05g07410.2Glyma05g07410.1Glyma17g08910.1Glyma13g37650.1Glyma12g32820.1
Glyma06g22730.1Glyma04g31770.1Glyma08g26480.1Glyma18g49960.1Glyma12g34280.1
Glyma12g16550.1Glyma13g36280.1Glyma03g31590.2Glyma03g31590.1Glyma19g34420.3
Glyma19g34420.2Glyma19g34420.1Glyma02g15990.1Glyma10g03770.3Glyma10g03770.2
Glyma10g03770.1Glyma06g41630.1Glyma13g05950.4Glyma13g05950.3Glyma13g05950.2
Glyma13g05950.1Glyma19g03460.4Glyma19g03460.3Glyma19g03460.2Glyma19g03460.1
Glyma08g42280.1Glyma18g12604.1Glyma14g03110.1Glyma02g45720.2Glyma08g42280.3
Glyma08g42280.2
Gossypium raimondiiGorai.001G188500.6Gorai.001G188500.5Gorai.001G188500.4Gorai.001G188500.3Gorai.001G188500.2
Gorai.001G188500.1Gorai.001G104800.2Gorai.001G104800.1Gorai.008G059800.3Gorai.008G059800.2
Gorai.008G059800.1Gorai.001G205700.2Gorai.001G205700.1Gorai.001G104800.3Gorai.001G188500.7
Gorai.013G063700.3Gorai.013G063700.2Gorai.013G063700.1Gorai.001G172800.1Gorai.004G155600.3
Gorai.004G155600.2Gorai.004G155600.1Gorai.007G093500.1Gorai.002G013600.1Gorai.010G190800.5
Gorai.010G190800.3Gorai.010G190800.2Gorai.010G190800.1Gorai.012G131400.1Gorai.007G040000.1
Gorai.012G049900.4Gorai.012G049900.2Gorai.012G049900.1Gorai.010G190800.4Gorai.009G185300.1
Gorai.002G082100.1Gorai.007G081500.4Gorai.007G081500.2Gorai.007G081500.1Gorai.013G164000.1
Gorai.001G243400.1Gorai.004G219100.1Gorai.007G142400.1Gorai.004G074600.1Gorai.012G049900.3
Gorai.007G081500.5Gorai.007G081500.3Gorai.002G082100.2Gorai.013G164000.2Gorai.012G042500.9
Gorai.012G042500.8Gorai.012G042500.7Gorai.012G042500.6Gorai.012G042500.5Gorai.012G042500.3
Gorai.012G042500.2Gorai.012G042500.10Gorai.012G042500.1Gorai.012G042500.4
Linum usitatissimumLus10011834Lus10022766Lus10003045Lus10009311Lus10036540
Lus10041389Lus10026546Lus10013832Lus10038739Lus10018554
Lus10013506Lus10007979Lus10039119Lus10032990Lus10015379
Lus10014750Lus10033861Lus10024859Lus10018773Lus10013189
Lus10030703Lus10035836Lus10036619
Malus domesticaMDP0000120543MDP0000132973MDP0000922600MDP0000290004MDP0000261777
MDP0000124691MDP0000210431MDP0000854555MDP0000594960MDP0000243946
MDP0000467359MDP0000256818MDP0000303446MDP0000252906MDP0000160619
MDP0000513437MDP0000243968MDP0000271287MDP0000310017MDP0000609623
MDP0000312108MDP0000238731MDP0000195879MDP0000281970MDP0000168165
MDP0000157869MDP0000152152MDP0000685698MDP0000179747
Manihot esculentacassava4.1_004725mcassava4.1_023788mcassava4.1_004712mcassava4.1_023909mcassava4.1_003142m
cassava4.1_002901mcassava4.1_002719mcassava4.1_003238mcassava4.1_003647mcassava4.1_005298m
cassava4.1_005277mcassava4.1_032323mcassava4.1_005259mcassava4.1_005287mcassava4.1_005224m
cassava4.1_004101mcassava4.1_009287mcassava4.1_007284mcassava4.1_032123m
Medicago truncatulaMedtr7g055600.1AC146721_1014.1Medtr2g027740.1Medtr3g107930.1Medtr7g075840.1
Medtr8g092000.2Medtr8g092000.1Medtr2g015550.1Medtr2g006790.1Medtr2g006760.1
Medtr2g082650.2Medtr2g082650.1Medtr6g013840.1Medtr4g133570.1Medtr7g012370.1
Mimulus guttatusmgv1a003761mmgv1a003891mmgv1a002354mmgv1a002760mmgv1a004359m
mgv1a002625mmgv1a004293mmgv1a004534mmgv1a004325mmgv1a004326m
mgv1a003230mmgv1a004225mmgv1a004198mmgv1a004260m
Oryza sativaLOC_Os02g29530.1LOC_Os09g36190.2LOC_Os09g36190.1LOC_Os06g49810.1LOC_Os09g36180.1
LOC_Os10g21890.2LOC_Os10g21890.1LOC_Os06g51160.1LOC_Os09g30280.1LOC_Os08g38740.1
LOC_Os08g23780.1LOC_Os04g54360.1LOC_Os03g30000.1LOC_Os06g12280.1LOC_Os02g51130.1
LOC_Os12g38930.1LOC_Os11g37980.1LOC_Os03g11330.1LOC_Os01g52710.1
Panicum virgatumPavirv00061950mPavirv00060594mPavirv00041812mPavirv00014771mPavirv00014770m
Pavirv00014769mPavirv00009328mPavirv00008912mPavirv00039944mPavirv00062614m
Pavirv00050016mPavirv00032585mPavirv00035093mPavirv00043038mPavirv00067407m
Pavirv00055112mPavirv00015507mPavirv00065232mPavirv00066980mPavirv00009329m
Pavirv00035094mPavirv00003326mPavirv00041981mPavirv00015393mPavirv00007172m
Pavirv00031307mPavirv00065296mPavirv00016072mPavirv00033462mPavirv00014352m
Pavirv00030037mPavirv00030036mPavirv00059245mPavirv00020743mPavirv00020990m
Pavirv00031794mPavirv00031793mPavirv00024701m
Physcomitrella patensPp1s251_8V6.1Pp1s128_25V6.1Pp1s21_294V6.1Pp1s507_8V6.4Pp1s507_8V6.3
Pp1s507_8V6.2Pp1s507_8V6.1Pp1s53_223V6.1Pp1s72_167V6.1Pp1s10_95V6.1
Pp1s16_361V6.1Pp1s18_97V6.1
Phaseolus vulgarisPhvul.008G283600.1Phvul.008G132200.1Phvul.004G045900.1Phvul.008G074000.1Phvul.010G087600.1
Phvul.009G115700.1Phvul.003G088900.2Phvul.003G088900.1Phvul.006G135100.1Phvul.009G203500.1
Phvul.003G182500.1Phvul.011G111900.1Phvul.005G107500.1Phvul.008G035400.1Phvul.005G091200.1
Phvul.001G157200.4Phvul.001G157200.3Phvul.001G157200.2Phvul.001G157200.1Phvul.007G177400.1
Phvul.004G034200.2Phvul.004G034200.1Phvul.011G141200.1Phvul.006G034100.1Phvul.008G190700.1
Phvul.008G190700.2
Picea abiesMA_9720735g0010MA_12186g0010MA_10431360g0010MA_130739g0010MA_110784g0010
MA_938560g0010MA_5732482g0010MA_118674g0010MA_10399g0020MA_10508g0010
MA_14268g0010MA_7999321g0010
Populus trichocarpaPotri.002G246500.1Potri.017G106800.3Potri.017G106800.2Potri.017G106800.1Potri.004G111000.2
Potri.004G111000.1Potri.008G010000.1Potri.002G151400.2Potri.002G151400.1Potri.014G073800.5
Potri.014G073800.4Potri.014G073800.3Potri.014G073800.2Potri.014G073800.1Potri.004G206000.3
Potri.004G206000.2Potri.004G206000.1Potri.016G001700.3Potri.016G001700.2Potri.006G001100.2
Potri.006G001100.1Potri.016G001700.1Potri.015G060800.3Potri.015G060800.2Potri.015G060800.1
Potri.013G146200.1Potri.019G108900.1Potri.019G105100.1Potri.012G064500.1Potri.017G090800.1
Potri.004G124500.2Potri.004G124500.1Potri.011G132600.1Potri.001G416800.1Potri.005G218900.2
Potri.005G218900.1Potri.014G142000.2Potri.014G142000.1
Prunus persicappa003603mppa002418mppa018681mppa003250mppa005253m
ppa004031mppa004063mppa004043mppa002758mppa023862m
ppa004045mppa005810m
Ricinus communis30217.m00025129832.m00031230174.m00893230053.m00010329805.m001535
30138.m00393529983.m00326329630.m00078729883.m00200228166.m001056
29993.m001048
Setaria italicaSi016867mSi029123mSi034827mSi029152mSi013390m
Si015690mSi009599mSi009596mSi009595mSi035034m
Si006285mSi020048mSi026393mSi034955mSi021715m
Si001402m
Selaginella moellendorffii111745141437230273146475440751
268781
Sorghum bicolorSb04g020140.1Sb02g030820.1Sb01g011560.1Sb10g030870.1Sb02g027840.1
Sb07g014890.1Sb06g029980.1Sb01g032570.1Sb10g008060.1Sb04g028010.1
Sb04g036420.1Sb05g022970.1Sb08g019260.1Sb03g033400.1
Thellungiella halophilaThhalv10002465mThhalv10020416mThhalv10005820mThhalv10024734mThhalv10000819m
Thhalv10007318mThhalv10001954mThhalv10020487mThhalv10013218mThhalv10013202m
Thhalv10007109mThhalv10016398mThhalv10005879m
Vitis viniferaGSVIVT01003922001GSVIVT01036507001GSVIVT01027574001GSVIVT01023883001GSVIVT01006978001
GSVIVT01030583001GSVIVT01008143001GSVIVT01011500001GSVIVT01014592001GSVIVT01000744001
GSVIVT01000800001
Zea maysAC177908.3_FGT002AC209664.3_FGT002
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)