| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00053670m |
| Family | GH17 |
| Protein Properties | Length: 320 Molecular Weight: 33721.4 Isoelectric Point: 6.3969 |
| Chromosome | Chromosome/Scaffold: 0108648 Start: 645 End: 1604 |
| Description | beta-1,3-glucanase 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 12 | 317 | 0 |
| VGVCYGTSGDNLPPASTVVGMLRENGFTVVRLYWPDPAALAALAGTGIKVVVGAPNDVLPALATSESAAAAWVRQNIQAHPLVTFRYVVVGNEVPAGETA HLVPAMENVHAALAAAGLGHVKVTTAISQGTIAVHLPPSAGEFTAEALSFMGYVVAFLERTRAPLLANLYPYFVYTNTLGMDMSFALFTSPGTVVQDGDY GYQNLFDATVDALHTAVAKLGGGRVRVVVSETGWPTAGGAAASVENAMTYNQNLVRHVRQGTPRRPTRRVEAYVFAMFNEDLKEAGVEQNWGLFYPNMDR VYPITF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 320 Download |
| MARSNAAGAA SVGVCYGTSG DNLPPASTVV GMLRENGFTV VRLYWPDPAA LAALAGTGIK 60 VVVGAPNDVL PALATSESAA AAWVRQNIQA HPLVTFRYVV VGNEVPAGET AHLVPAMENV 120 HAALAAAGLG HVKVTTAISQ GTIAVHLPPS AGEFTAEALS FMGYVVAFLE RTRAPLLANL 180 YPYFVYTNTL GMDMSFALFT SPGTVVQDGD YGYQNLFDAT VDALHTAVAK LGGGRVRVVV 240 SETGWPTAGG AAASVENAMT YNQNLVRHVR QGTPRRPTRR VEAYVFAMFN EDLKEAGVEQ 300 NWGLFYPNMD RVYPITFGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 8.0e-8 | 233 | 308 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-116 | 12 | 317 | 311 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB85436.1 | 0 | 8 | 319 | 6 | 319 | putative glucanase [Oryza sativa Japonica Group] |
| EMBL | CAJ58505.1 | 0 | 9 | 316 | 21 | 330 | licheninase [Secale cereale] |
| GenBank | EEE55985.1 | 0 | 8 | 319 | 51 | 364 | hypothetical protein OsJ_04727 [Oryza sativa Japonica Group] |
| RefSeq | NP_001151398.1 | 0 | 7 | 319 | 32 | 347 | lichenase-2 [Zea mays] |
| RefSeq | XP_002459076.1 | 0 | 4 | 319 | 33 | 351 | hypothetical protein SORBIDRAFT_03g045480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 12 | 317 | 1 | 306 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1aq0_B | 0 | 12 | 317 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 12 | 317 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 12 | 317 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 12 | 317 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CB673940 | 279 | 9 | 286 | 0 |
| CB670461 | 269 | 9 | 276 | 0 |
| CB654106 | 258 | 61 | 317 | 0 |
| CB644222 | 258 | 61 | 317 | 0 |
| CA240619 | 188 | 137 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
