CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00053907m
FamilyGT13
Protein PropertiesLength: 322 Molecular Weight: 37409.4 Isoelectric Point: 7.2697
ChromosomeChromosome/Scaffold: 021890 Start: 4177 End: 7142
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT1373160
  RYQTSVASKFPLFISQDGTNGAVKKKALDYKQITYMQHVNLEPVRTERPGELTAYYKIAKHYKWALDELFIKHNFSRVIILEDDMEIAPDFFDYFEAAAK
  LLDNDKTIMAVSSWNDNGQKQFVNDPKALYRSDFFPGLGWMLTKSTWLELSPKWPKAYWDDWVRLKEIHGNRQFIRPEICRTYNFGKHGSSLGQFFEQYL
  EPIKLNDVHIDWNSEDLSYLGEDKFSTKFGKEVASATPLHGSDAVLKAHSMATDVRIQYDDQEDFERIARQFGIFEEWKDGIPRTAYKGVVVFRYKSSPR
  RIFLVSPDSV
Full Sequence
Protein Sequence     Length: 322     Download
MNNTCSRYQT SVASKFPLFI SQDGTNGAVK KKALDYKQIT YMQHVNLEPV RTERPGELTA    60
YYKIAKHYKW ALDELFIKHN FSRVIILEDD MEIAPDFFDY FEAAAKLLDN DKTIMAVSSW    120
NDNGQKQFVN DPKALYRSDF FPGLGWMLTK STWLELSPKW PKAYWDDWVR LKEIHGNRQF    180
IRPEICRTYN FGKHGSSLGQ FFEQYLEPIK LNDVHIDWNS EDLSYLGEDK FSTKFGKEVA    240
SATPLHGSDA VLKAHSMATD VRIQYDDQED FERIARQFGI FEEWKDGIPR TAYKGVVVFR    300
YKSSPRRIFL VSPDSVRQLG V* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06532Glyco_transf_250.00062811696+
cd02514GT13_GLCNAC-TI6.0e-1527315315+
pfam03071GNT-I6.0e-1727320319+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF83572.107321111425unknown [Zea mays]
GenBankACG37957.107321128442N-acetylglucosaminyltransferase I [Zea mays]
RefSeqNP_001048631.107321128442Os02g0832800 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001142278.107321128442hypothetical protein LOC100274447 [Zea mays]
RefSeqXP_002441861.107321128442hypothetical protein SORBIDRAFT_08g003660 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2apc_A01331529333A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose
PDB2am5_A01331529333A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose
PDB2am4_A01331529333A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose
PDB2am3_A01331529333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I In Complex With Udp-Glucose
PDB1foa_A01331535339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GT04747028872940
JG822016257242800
GO838868257653210
EH731153290323210
GD013518221492690
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny