Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00054177m |
Family | CE16 |
Protein Properties | Length: 338 Molecular Weight: 36372.2 Isoelectric Point: 8.7469 |
Chromosome | Chromosome/Scaffold: 0216216 Start: 40 End: 1402 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 89 | 328 | 9e-22 |
LIGANFASAASSYHDDTAAMYDAITLTQQLEYYKEYQSKLTAVAGRGTARSILSGALYVVSTGTGDFLQNYYHNASLSRRYNVPRYCDLLIGIFSDLAEK LYKLGARRIGVTSMPPLGCFPASIRLYGKGRSACVARLNRDADTFNRKLNATVKVLKGRHADLKIAIFDIYTPLRKLAEAPVEQGFANARGTCCRTGTAK TRVYLCNPTTAGTCRNASSYVFFDGVHPSEAANVFMAESM |
Full Sequence |
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Protein Sequence Length: 338 Download |
MSGGVQAQPL LPAVISFGDS TVDVGNNNYL PRAVFKANYA PYGESFAGHE PTGRFSDGKI 60 VTDITADTLG FESYAPPYLS PQASGKNLLI GANFASAASS YHDDTAAMYD AITLTQQLEY 120 YKEYQSKLTA VAGRGTARSI LSGALYVVST GTGDFLQNYY HNASLSRRYN VPRYCDLLIG 180 IFSDLAEKLY KLGARRIGVT SMPPLGCFPA SIRLYGKGRS ACVARLNRDA DTFNRKLNAT 240 VKVLKGRHAD LKIAIFDIYT PLRKLAEAPV EQGFANARGT CCRTGTAKTR VYLCNPTTAG 300 TCRNASSYVF FDGVHPSEAA NVFMAESMVE AGIDLVT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00657 | Lipase_GDSL | 7.0e-11 | 95 | 326 | 254 | + GDSL-like Lipase/Acylhydrolase. | ||
COG3240 | COG3240 | 1.0e-19 | 7 | 328 | 339 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
cd01846 | fatty_acyltransferase_like | 1.0e-32 | 14 | 331 | 321 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 5.0e-91 | 11 | 329 | 319 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 2.0e-113 | 12 | 328 | 317 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC80013.1 | 0 | 3 | 337 | 26 | 343 | hypothetical protein OsI_21681 [Oryza sativa Indica Group] |
GenBank | EEE65090.1 | 0 | 3 | 337 | 26 | 343 | hypothetical protein OsJ_20133 [Oryza sativa Japonica Group] |
RefSeq | NP_001140661.1 | 0 | 1 | 337 | 21 | 359 | hypothetical protein LOC100272736 [Zea mays] |
RefSeq | XP_002436473.1 | 0 | 4 | 337 | 28 | 360 | hypothetical protein SORBIDRAFT_10g003340 [Sorghum bicolor] |
RefSeq | XP_002436480.1 | 0 | 5 | 337 | 14 | 346 | hypothetical protein SORBIDRAFT_10g003420 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3kvn_A | 0.001 | 144 | 326 | 148 | 310 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 3kvn_X | 0.001 | 144 | 326 | 148 | 310 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE650393 | 251 | 53 | 303 | 0 |
HO266072 | 202 | 1 | 202 | 0 |
HO852368 | 333 | 6 | 338 | 0 |
HO781389 | 326 | 10 | 335 | 0 |
DT939517 | 241 | 1 | 239 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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