Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00054446m |
Family | GT43 |
Protein Properties | Length: 206 Molecular Weight: 21095.1 Isoelectric Point: 10.3773 |
Chromosome | Chromosome/Scaffold: 0216799 Start: 5 End: 622 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 123 | 204 | 4.1e-31 |
MAHTLRLAAPPLLWVVVEAAPDVPATARLLRATGLLYRHLTYKDNFTAADAAAGKERHHQQNVALGHIEHHRLAGVVLFAGL |
Full Sequence |
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Protein Sequence Length: 206 Download |
MGSSADHGGA GGRGKKQGSQ LWKKALLHSC LCFVMGFFTG FAPSSVSDWT SAAVSAGGVG 60 SSHVVRALQT AAGGAVNRSL LAHGGAGLLD AAAATPRPLL VVITTTESTP AASGERAAAL 120 TRMAHTLRLA APPLLWVVVE AAPDVPATAR LLRATGLLYR HLTYKDNFTA ADAAAGKERH 180 HQQNVALGHI EHHRLAGVVL FAGLGD |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 3.0e-9 | 123 | 203 | 91 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 3.0e-15 | 98 | 202 | 110 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 2.0e-35 | 21 | 206 | 208 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95369.1 | 0 | 1 | 206 | 1 | 204 | Glycosyltransferase family 43 protein, expressed [Oryza sativa (japonica cultivar-group)] |
DDBJ | BAF11694.2 | 0 | 1 | 206 | 1 | 204 | Os03g0287800 [Oryza sativa Japonica Group] |
RefSeq | NP_001049780.1 | 0 | 1 | 206 | 1 | 204 | Os03g0287800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147664.1 | 0 | 1 | 206 | 1 | 207 | beta3-glucuronyltransferase [Zea mays] |
RefSeq | XP_002468048.1 | 0 | 1 | 206 | 1 | 214 | hypothetical protein SORBIDRAFT_01g038640 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.00000004 | 98 | 162 | 3 | 63 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1v84_A | 0.00000004 | 98 | 162 | 3 | 63 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1v83_B | 0.00000004 | 98 | 162 | 3 | 63 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1v83_A | 0.00000004 | 98 | 162 | 3 | 63 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1v82_B | 0.00000004 | 98 | 162 | 3 | 63 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC999368 | 187 | 21 | 205 | 0 |
EE157383 | 186 | 21 | 206 | 0 |
HX129161 | 186 | 21 | 206 | 0 |
HX189120 | 186 | 21 | 206 | 0 |
HX163937 | 186 | 21 | 206 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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