| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00054859m |
| Family | AA1 |
| Protein Properties | Length: 477 Molecular Weight: 52392.3 Isoelectric Point: 7.7872 |
| Chromosome | Chromosome/Scaffold: 021595 Start: 155 End: 1993 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 4 | 234 | 0 |
| VTVANGRLPGPAVEVTEGDAVAVHVVNKSPHNITIHWHGLKQRVNCWADGVPSVTQCPIRPGHNLTYRLNVTGQEGTLWWHAHVSCLRASLHGAFVVRPR RACPFPKPDKEIPIVIGEWWNLNLAQLAKNMEDGCYDDSSSATTINGKLGDLYNCSGVVEDAFVLDVEPRQDLPAPAINAALYSEYYVKIAGHRFTVVGA DATNYVRPFATDVVAIGPGETVDALAPKPDI | |||
| Full Sequence |
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| Protein Sequence Length: 477 Download |
| RWLVTVANGR LPGPAVEVTE GDAVAVHVVN KSPHNITIHW HGLKQRVNCW ADGVPSVTQC 60 PIRPGHNLTY RLNVTGQEGT LWWHAHVSCL RASLHGAFVV RPRRACPFPK PDKEIPIVIG 120 EWWNLNLAQL AKNMEDGCYD DSSSATTING KLGDLYNCSG VVEDAFVLDV EPRQDLPAPA 180 INAALYSEYY VKIAGHRFTV VGADATNYVR PFATDVVAIG PGETVDALAP KPDIQIPETR 240 SRATVRYTSG GGGEAPPPVA PEMPDQHDYM VSFNFHCNMS SLRRRHPRPP PRADESLFVA 300 LRMGSVCRGG RASCKRSGSK ESIIVETMNN VSFQLPAASA ATPLLEEHYR HRNGTAAAWS 360 SCGRCRIGRP FNFTDRALIP WGPNEAWLEP TEKAAAARRL RHGAVVDVVF QNTAVVDTDN 420 HPMHLHGHDV FVLPQGHDNY DAARDAARYN LVDPPLKNTV LVPRLGWAAV RFVADNP 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 2.0e-18 | 328 | 477 | 153 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02191 | PLN02191 | 5.0e-27 | 3 | 228 | 252 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 4.0e-29 | 3 | 228 | 251 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-41 | 1 | 103 | 105 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 5.0e-116 | 3 | 477 | 500 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2XCN6 | 0 | 4 | 477 | 52 | 544 | LAC18_ORYSI RecName: Full=Putative laccase-18; AltName: Full=Benzenediol:oxygen oxidoreductase 18; AltName: Full=Urishiol oxidase 18; AltName: Full=Diphenol oxidase 18; Flags: Precursor |
| RefSeq | NP_001064399.1 | 0 | 5 | 477 | 62 | 559 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146681.1 | 0 | 4 | 477 | 61 | 559 | hypothetical protein LOC100280281 [Zea mays] |
| RefSeq | XP_002449982.1 | 0 | 4 | 477 | 52 | 555 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 3 | 477 | 50 | 550 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 7.00649e-43 | 3 | 477 | 23 | 500 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1asq_A | 7.00649e-43 | 3 | 477 | 23 | 500 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1asp_B | 7.00649e-43 | 3 | 477 | 23 | 500 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1asp_A | 7.00649e-43 | 3 | 477 | 23 | 500 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aso_B | 7.00649e-43 | 3 | 477 | 23 | 500 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG387254 | 226 | 3 | 228 | 0 |
| HX190751 | 226 | 3 | 228 | 0 |
| HX167463 | 201 | 3 | 203 | 0 |
| EG387700 | 259 | 100 | 337 | 0 |
| EG385564 | 189 | 3 | 191 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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