Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00054869m |
Family | GH17 |
Protein Properties | Length: 420 Molecular Weight: 46102.1 Isoelectric Point: 7.7887 |
Chromosome | Chromosome/Scaffold: 0211416 Start: 246 End: 2016 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 50 | 361 | 0 |
GINYGRIADNLPPPEDVVRLLKLARIRNVKIYDADHKVLDAFRGSGLNLVVAIPNEFLKDMAANPSKAMDWLNENVQPYYPSTRIVGITVGNEVLGGGDT GLAEALVGAVVNVHDALRMLRLDRKIELSTPHSEAVFANSYPPSACVFRDDLMVYLRPLLDFFSKTGAPFYVNAYPFLAYMSDPSHIDINYALFKPNSGI VDPKTNLHYDNMFEAQLDAAYFALEAAGYPGMEVRVAETGWASAGDATEAGAGMADAITYNRNLRKRLFLRKGTPYRPERVAKAYIFALFNENLKPGPTT ERHFGLFKPDGS |
Full Sequence |
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Protein Sequence Length: 420 Download |
MAPRWKSGDG RRRLLLLLCC CLLAFPCHAQ VTNVSHRSDQ AIHSFVGTYG INYGRIADNL 60 PPPEDVVRLL KLARIRNVKI YDADHKVLDA FRGSGLNLVV AIPNEFLKDM AANPSKAMDW 120 LNENVQPYYP STRIVGITVG NEVLGGGDTG LAEALVGAVV NVHDALRMLR LDRKIELSTP 180 HSEAVFANSY PPSACVFRDD LMVYLRPLLD FFSKTGAPFY VNAYPFLAYM SDPSHIDINY 240 ALFKPNSGIV DPKTNLHYDN MFEAQLDAAY FALEAAGYPG MEVRVAETGW ASAGDATEAG 300 AGMADAITYN RNLRKRLFLR KGTPYRPERV AKAYIFALFN ENLKPGPTTE RHFGLFKPDG 360 SVSINIGLKG LVPSSAPPPP SSLMALFQVY IHDALICLAA QSSVIDIGVC VRMHVCYTI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-96 | 50 | 361 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN32059.1 | 0 | 3 | 380 | 4 | 385 | unknown [Zea mays] |
DDBJ | BAD15845.1 | 0 | 40 | 372 | 50 | 382 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC72694.1 | 0 | 40 | 372 | 50 | 382 | hypothetical protein OsI_06270 [Oryza sativa Indica Group] |
GenBank | EEE56513.1 | 0 | 40 | 372 | 50 | 382 | hypothetical protein OsJ_05789 [Oryza sativa Japonica Group] |
RefSeq | XP_002453496.1 | 0 | 3 | 380 | 4 | 371 | hypothetical protein SORBIDRAFT_04g006850 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 50 | 368 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3f55_C | 0 | 50 | 368 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3f55_B | 0 | 50 | 368 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3f55_A | 0 | 50 | 368 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3em5_D | 0 | 50 | 368 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |