Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00055122m |
Family | CE10 |
Protein Properties | Length: 334 Molecular Weight: 35667.6 Isoelectric Point: 6.8515 |
Chromosome | Chromosome/Scaffold: 078294 Start: 77 End: 1078 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 43 | 324 | 0 |
VPGVQWKDVVYDATRGLRARVYRPPAAAAGEGRKLPVLVYFHGGGYCLREYDQPMFHSCCQRLAAELPAVVLSAQYRRAPEHRLPAAVEDSAAFLSWLRA QGAPGAAAAEPWLAESADFARTFGTGVSAGANLAHHAVVRVASGQLVLGPARVAGYVLFSAFFGSVERVASEAAPPPEVSLTVETTDKFWRLALPVGATR DHPLANPFGPDSPTLEPLPLPPALVVAPGRDVLCGHMLRYAAKLKEMGKAVELAEFPGERHGFSKGQWSEATDELIQILKRF |
Full Sequence |
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Protein Sequence Length: 334 Download |
MSSGTAPPHV VENLHGVLQL FSDGSVVRGD ESAIMPAGRF PDVPGVQWKD VVYDATRGLR 60 ARVYRPPAAA AGEGRKLPVL VYFHGGGYCL REYDQPMFHS CCQRLAAELP AVVLSAQYRR 120 APEHRLPAAV EDSAAFLSWL RAQGAPGAAA AEPWLAESAD FARTFGTGVS AGANLAHHAV 180 VRVASGQLVL GPARVAGYVL FSAFFGSVER VASEAAPPPE VSLTVETTDK FWRLALPVGA 240 TRDHPLANPF GPDSPTLEPL PLPPALVVAP GRDVLCGHML RYAAKLKEMG KAVELAEFPG 300 ERHGFSKGQW SEATDELIQI LKRFVRSCTN DSE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1506 | DAP2 | 0.001 | 277 | 326 | 50 | + Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | ||
pfam00135 | COesterase | 0.0005 | 73 | 119 | 52 | + Carboxylesterase family. | ||
PRK10162 | PRK10162 | 2.0e-5 | 79 | 305 | 228 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 7.0e-20 | 75 | 324 | 254 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-43 | 80 | 305 | 231 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF82397.1 | 0 | 3 | 325 | 2 | 328 | unknown [Zea mays] |
RefSeq | NP_001148081.1 | 0 | 1 | 325 | 1 | 328 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002455176.1 | 0 | 3 | 330 | 2 | 340 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
RefSeq | XP_002455177.1 | 0 | 3 | 326 | 5 | 338 | hypothetical protein SORBIDRAFT_03g005580 [Sorghum bicolor] |
RefSeq | XP_002455178.1 | 0 | 3 | 333 | 2 | 325 | hypothetical protein SORBIDRAFT_03g005590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 2.94273e-44 | 35 | 322 | 52 | 348 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ed1_E | 2.94273e-44 | 35 | 322 | 52 | 348 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ed1_D | 2.94273e-44 | 35 | 322 | 52 | 348 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ed1_C | 2.94273e-44 | 35 | 322 | 52 | 348 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ed1_B | 2.94273e-44 | 35 | 322 | 52 | 348 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CT846193 | 328 | 1 | 320 | 0 |
FL821289 | 244 | 3 | 240 | 0 |
EE295886 | 225 | 1 | 218 | 0 |
FL750264 | 223 | 103 | 325 | 0 |
DV029843 | 240 | 3 | 236 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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