| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00055389m |
| Family | AA1 |
| Protein Properties | Length: 349 Molecular Weight: 37104.3 Isoelectric Point: 8.3206 |
| Chromosome | Chromosome/Scaffold: 076518 Start: 1 End: 1173 |
| Description | laccase 17 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 1 | 335 | 0 |
| LRLVNAALNDELFFAVANHTLTVVGADASYVKPFAATTLVISPGQTMDVLLAAAASPPAPAFAIVVAPYTNTVGTFDNTTAVAALEYAPQGAAALRSLPA PALPLYNDTGAVANFSAKFRSLASARYPARVPRSVDRRFFFAVGLGADPCRSRVNGTCQGPNGTRFAASMNNVSFTMPKTSLLQAHYQRRYGGVLMANFP AAPPVLFNYTGAPPNNTFVTHGTRVVPLGFNTTVEVVLQDTSILGAESHPVHLHGYDFFVVGQGFGNYDAANDTARYNLVDPVQRNTVSVPTAGWVAIRF IADNPGIWIMHCHLDVHLSWGLAMAWLVNDGPLPN | |||
| Full Sequence |
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| Protein Sequence Length: 349 Download |
| LRLVNAALND ELFFAVANHT LTVVGADASY VKPFAATTLV ISPGQTMDVL LAAAASPPAP 60 AFAIVVAPYT NTVGTFDNTT AVAALEYAPQ GAAALRSLPA PALPLYNDTG AVANFSAKFR 120 SLASARYPAR VPRSVDRRFF FAVGLGADPC RSRVNGTCQG PNGTRFAASM NNVSFTMPKT 180 SLLQAHYQRR YGGVLMANFP AAPPVLFNYT GAPPNNTFVT HGTRVVPLGF NTTVEVVLQD 240 TSILGAESHP VHLHGYDFFV VGQGFGNYDA ANDTARYNLV DPVQRNTVSV PTAGWVAIRF 300 IADNPGIWIM HCHLDVHLSW GLAMAWLVND GPLPNQKLPP PPSDIPKC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 5.0e-35 | 1 | 326 | 335 | + L-ascorbate oxidase | ||
| pfam07731 | Cu-oxidase_2 | 3.0e-43 | 199 | 331 | 139 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 3.0e-45 | 12 | 322 | 320 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-52 | 6 | 322 | 324 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 4.0e-177 | 1 | 348 | 349 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001055744.1 | 0 | 1 | 319 | 189 | 509 | Os05g0458300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105874.1 | 0 | 1 | 348 | 232 | 582 | putative laccase [Zea mays] |
| Swiss-Prot | Q0DHL5 | 0 | 1 | 348 | 189 | 539 | LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11 |
| RefSeq | XP_002441216.1 | 0 | 1 | 348 | 191 | 544 | hypothetical protein SORBIDRAFT_09g022460 [Sorghum bicolor] |
| RefSeq | XP_002456622.1 | 0 | 1 | 348 | 235 | 579 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 3e-38 | 6 | 324 | 225 | 519 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asq_A | 3e-38 | 6 | 324 | 225 | 519 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asp_B | 3e-38 | 6 | 324 | 225 | 519 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asp_A | 3e-38 | 6 | 324 | 225 | 519 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1aso_B | 3e-38 | 6 | 324 | 225 | 519 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CA216337 | 223 | 72 | 292 | 0 |
| FL761925 | 243 | 107 | 349 | 0 |
| BI958400 | 210 | 106 | 315 | 0 |
| FL741084 | 213 | 137 | 349 | 0 |
| GR366996 | 257 | 38 | 294 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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