CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00055508m
FamilyGT4
Protein PropertiesLength: 412 Molecular Weight: 45606.1 Isoelectric Point: 5.7585
ChromosomeChromosome/Scaffold: 079105 Start: 105 End: 1340
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41943452.6e-21
  GRGFVFLSVFKWEQRKGWDVLLKAFLQEFSGADDVVLYLLINAYHSDTNFIGKIRRFVEESSIKEPVEGWAEIRVIDEHVPQSSLPSLYKAADAFVLPTR
  GEGWGRPVVEAMAMALPVIVTNWSGPTEYLTEENGYPLRIDSLTEVTEGPFK
Full Sequence
Protein Sequence     Length: 412     Download
MAPFVSGGGY CSEAWSYVAA LDAHAAVGAG RNFTLAIAHH GDLESPEFWF GLPEQSKKLA    60
YRLAATRCEL ARAVVVCHSE PGAWYPPMYD ALPCPPTGYD DPAFVIGRTM FETDRVSPEH    120
VRRCNQMDAV WVPTDFHVST FVKSGVDRAK VVKVVQAVDV EFFDPANHVA LPLPIGVPVM    180
VPEGSRLEHG DPKGRGFVFL SVFKWEQRKG WDVLLKAFLQ EFSGADDVVL YLLINAYHSD    240
TNFIGKIRRF VEESSIKEPV EGWAEIRVID EHVPQSSLPS LYKAADAFVL PTRGEGWGRP    300
VVEAMAMALP VIVTNWSGPT EYLTEENGYP LRIDSLTEVT EGPFKGHLCA EPSVDHLRAL    360
MRRVVGVREE ARSKGKKARE DMMDKFSPEI VARIVADKIQ QVLVSTHLTE G*            420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03808GT1_cap1E_like5.0e-17197397202+
pfam00534Glycos_transf_11.0e-17197381192+
cd03801GT1_YqgM_like6.0e-20186393220+
COG0438RfaG6.0e-20161403243+
cd03798GT1_wlbH_like2.0e-22182402228+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG32958.10941013416glycosyl transferase, group 1 [Zea mays]
GenBankEEC84295.10140683488hypothetical protein OsI_30774 [Oryza sativa Indica Group]
RefSeqNP_001062800.10140682487Os09g0296700 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001137122.10141087498hypothetical protein LOC100217302 [Zea mays]
RefSeqXP_002462114.10141092499hypothetical protein SORBIDRAFT_02g019400 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3c48_B0.0001108318159359A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.0001108318159359A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_B0.0002108318139339A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_A0.0002108318139339A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4q_B0.0002108318139339A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CJ688631234863190
GT8088202131914030
HO2692451782354120
HO2692461782354120
EG374744208322390
Orthologous Group
SpeciesID
Brachypodium distachyonBradi4g27470.1
Citrus clementinaCiclev10015484m
Eucalyptus grandisEucgr.G02680.1
Oryza sativaLOC_Os09g12530.1
Populus trichocarpaPotri.008G018200.1
Setaria italicaSi029608m
Sorghum bicolorSb02g019400.1
Vitis viniferaGSVIVT01034635001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny