CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00055510m
FamilyAA2
Protein PropertiesLength: 215 Molecular Weight: 22911.6 Isoelectric Point: 9.0073
ChromosomeChromosome/Scaffold: 077477 Start: 2319 End: 3662
DescriptionPeroxidase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA2562078e-35
  RKDPTANAPLLRLHFHDCFVRGCEGSVLLNSTKGNAAEKDAKPNHTLDAFDVIDDIKAALEKECPGKVSCADILAIAARDAVSLATKVVTKGEWSKDGNL
  YEVETGRQDGRVSSAKEAVKNLPDSFDGIRKLIKRFASKNLSLKDLAVLSGS
Full Sequence
Protein Sequence     Length: 215     Download
MAVRVLPPPV LLLALLLALV ASVAHGGDGK LKVGFYKDSC PDAEAIVRRI VAKAVRKDPT    60
ANAPLLRLHF HDCFVRGCEG SVLLNSTKGN AAEKDAKPNH TLDAFDVIDD IKAALEKECP    120
GKVSCADILA IAARDAVSLA TKVVTKGEWS KDGNLYEVET GRQDGRVSSA KEAVKNLPDS    180
FDGIRKLIKR FASKNLSLKD LAVLSGSDLH KLPH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00314plant_peroxidase_like8.0e-1247213182+
PLN03030PLN030302.0e-5132206175+
pfam00141peroxidase4.0e-5747206161+
cd00693secretory_peroxidase3.0e-9430207178+
Gene Ontology
GO TermDescription
GO:0004601peroxidase activity
GO:0006979response to oxidative stress
GO:0020037heme binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACN26934.103020743220unknown [Zea mays]
GenBankACN33541.103020743220unknown [Zea mays]
RefSeqNP_001050495.103520743215Os03g0563600 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001148726.103020743220peroxidase 27 [Zea mays]
RefSeqXP_002466914.103020743220hypothetical protein SORBIDRAFT_01g016600 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3hdl_A9.94922e-44312142175A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree
PDB4a5g_B2e-39292072170A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB4a5g_A2e-39292072170A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB1sch_B6e-39302071168A Chain A, Peanut Peroxidase
PDB1sch_A6e-39302071168A Chain A, Peanut Peroxidase
Metabolic Pathways
Pathway NameReactionECProtein Name
betanidin degradationRXN-8635EC-1.11.1.7peroxidase
Transmembrane Domains
StartEnd
527
Signal Peptide
Cleavage Site
26
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FE59836220712070
FE64953920712070
FL910152184222050
FE607972183252070
FL92025020712070
Orthologous Group
SpeciesID
Brassica rapaBra008715
Carica papayaevm.model.supercontig_16.92evm.model.supercontig_2186.1
Citrus sinensisorange1.1g041339m
Eucalyptus grandisEucgr.L01603.1Eucgr.H03669.1Eucgr.H03668.1
Malus domesticaMDP0000572590
Mimulus guttatusmgv1a014238m
Panicum virgatumPavirv00056620mPavirv00020581mPavirv00056619mPavirv00054667mPavirv00057804m
Pavirv00021339m
Picea abiesMA_946965g0010MA_3930037g0010MA_10433598g0020MA_48212g0010MA_149004g0010
MA_142961g0010MA_7571130g0010MA_10431507g0030
Populus trichocarpaPotri.T106200.1
Ricinus communis29726.m003967
Setaria italicaSi003834m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny