| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00055525m |
| Family | AA1 |
| Protein Properties | Length: 558 Molecular Weight: 62051.9 Isoelectric Point: 8.8551 |
| Chromosome | Chromosome/Scaffold: 077082 Start: 854 End: 3443 |
| Description | SKU5 similar 11 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 50 | 508 | 0 |
| PQKVILINGQFPGPTINCTSNNNILVNVFNMLDQPLLFHWHGIQQRKNSWQDGLPGTMCPILPNTNWTYHWQPKDQIGSFYYFPSIGMQRAAGGYGLITV HSRDLIPVPFAPPADDFPVLVGDWYTKDHEVLAKNLDSGKGIGRPAGLIINGKNEKDASNPPMYNVEAGKTYRFRVCNVGIKASLNVRVQKHILKLVEME GSHTVQNTYDSLDVHIGQCLSFLVTADQAPGDYLLVASTRFIKEVNTITAVIRYKGSSAPPPQQIPESPSGWAWSINQWRSFRWNLTASAARPNPQGSYH YGQINITRTIKLSISHGKVDGKERYALNGVSHVDPDTPLKLAEYFNATNGVFQYNLIGDVPPAAGTPIKMAPNVISAEFRTFIEVVFENPEKSIDTFHIN GYAFFAAGMGPGTWTPQCRKTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWNIRSNL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MVWSAMTMRG ACAAALLVLV ALAAGARAED PYHFFEWKVT YGTKNILGTP QKVILINGQF 60 PGPTINCTSN NNILVNVFNM LDQPLLFHWH GIQQRKNSWQ DGLPGTMCPI LPNTNWTYHW 120 QPKDQIGSFY YFPSIGMQRA AGGYGLITVH SRDLIPVPFA PPADDFPVLV GDWYTKDHEV 180 LAKNLDSGKG IGRPAGLIIN GKNEKDASNP PMYNVEAGKT YRFRVCNVGI KASLNVRVQK 240 HILKLVEMEG SHTVQNTYDS LDVHIGQCLS FLVTADQAPG DYLLVASTRF IKEVNTITAV 300 IRYKGSSAPP PQQIPESPSG WAWSINQWRS FRWNLTASAA RPNPQGSYHY GQINITRTIK 360 LSISHGKVDG KERYALNGVS HVDPDTPLKL AEYFNATNGV FQYNLIGDVP PAAGTPIKMA 420 PNVISAEFRT FIEVVFENPE KSIDTFHING YAFFAAGMGP GTWTPQCRKT YNLLDTVSRH 480 TIQVYPRSWT AVMMTFDNAG MWNIRSNLWE RHYLGEQLYM SVVSPARSLR DEYNMPETSL 540 RCGKVVGLPM PPSYAAA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02168 | PLN02168 | 2.0e-176 | 31 | 545 | 531 | + copper ion binding / pectinesterase | ||
| PLN02354 | PLN02354 | 0 | 29 | 556 | 529 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 29 | 547 | 520 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 29 | 547 | 519 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 29 | 551 | 527 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27218.1 | 0 | 1 | 556 | 1 | 556 | unknown [Zea mays] |
| GenBank | ACN34077.1 | 0 | 1 | 556 | 1 | 558 | unknown [Zea mays] |
| RefSeq | NP_001044620.1 | 0 | 27 | 557 | 22 | 553 | Os01g0816700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151662.1 | 0 | 1 | 556 | 1 | 558 | L-ascorbate oxidase [Zea mays] |
| RefSeq | XP_002456532.1 | 0 | 1 | 554 | 1 | 555 | hypothetical protein SORBIDRAFT_03g037970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 35 | 543 | 6 | 539 | A Chain A, Peanut Peroxidase |
| PDB | 1asq_A | 0 | 35 | 543 | 6 | 539 | A Chain A, Peanut Peroxidase |
| PDB | 1asp_B | 0 | 35 | 543 | 6 | 539 | A Chain A, Peanut Peroxidase |
| PDB | 1asp_A | 0 | 35 | 543 | 6 | 539 | A Chain A, Peanut Peroxidase |
| PDB | 1aso_B | 0 | 35 | 543 | 6 | 539 | A Chain A, Peanut Peroxidase |
