| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00055571m |
| Family | GT92 |
| Protein Properties | Length: 511 Molecular Weight: 56708 Isoelectric Point: 8.6259 |
| Chromosome | Chromosome/Scaffold: 075937 Start: 1565 End: 3553 |
| Description | Domain of unknown function (DUF23) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT92 | 249 | 456 | 0 |
| DYLYCGSSLYGELSAARVREWMAYHARFFGDRSHFVFHDAGGVGPAVRAALEPWVRAGRATLQDVRAEAEYDGWYHNQFLVVNDCLHRYRHAAKWTFFFD VDEYIFLPDGRKLDDVLAELEPYTQFTIEQNPMSSRLCVDNPDADYSNQWGFEKLVFRNSITGVRRDRKYAIQAKNAYATGVHMSENVIGNTTHKTEHLI RYYHYHNS | |||
| Full Sequence |
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| Protein Sequence Length: 511 Download |
| MRKDAAGGGA GGGISPGALP CFDIKPFLAA LTTLTLLTAA WQLRPYRSLL AAPFPADACA 60 QPAAGAPPRA LAVHAKKSQS SSAANSTAPS SPPPPPPSGP EVREFRAVGS AAALFVQMGA 120 YRGGPYTFAV VGLASKPTHV YGKPWFRCEW EPNNPPRYNA SSSSPPEPMR AARTYHMLPD 180 WGYGRVYTVV VVNCTFPRAP NADNAGGRLV LYAHRGPSRS PLERIVALEE APGAYDEAAF 240 RLSTPPRYDY LYCGSSLYGE LSAARVREWM AYHARFFGDR SHFVFHDAGG VGPAVRAALE 300 PWVRAGRATL QDVRAEAEYD GWYHNQFLVV NDCLHRYRHA AKWTFFFDVD EYIFLPDGRK 360 LDDVLAELEP YTQFTIEQNP MSSRLCVDNP DADYSNQWGF EKLVFRNSIT GVRRDRKYAI 420 QAKNAYATGV HMSENVIGNT THKTEHLIRY YHYHNSINVL GEVCREFVPI PPKGGLTWSE 480 KTPWYYDDSM KRVADAVREF ERKTIGDVRL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13704 | Glyco_tranf_2_4 | 0.0002 | 263 | 365 | 104 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
| pfam01697 | Glyco_transf_92 | 4.0e-24 | 248 | 463 | 236 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ01730.1 | 0 | 18 | 510 | 22 | 522 | hypothetical protein OsI_23756 [Oryza sativa Indica Group] |
| GenBank | EAZ37686.1 | 0 | 18 | 510 | 22 | 522 | hypothetical protein OsJ_22025 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058107.1 | 0 | 18 | 510 | 22 | 489 | Os06g0624700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130404.1 | 0 | 1 | 510 | 1 | 501 | hypothetical protein LOC100191500 [Zea mays] |
| RefSeq | XP_002437304.1 | 0 | 1 | 510 | 1 | 509 | hypothetical protein SORBIDRAFT_10g024570 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT644771 | 275 | 114 | 385 | 0 |
| FL853471 | 228 | 247 | 474 | 0 |
| EL681770 | 284 | 168 | 451 | 0 |
| FL853471 | 35 | 455 | 489 | 0.002 |
| FL853471 | 9 | 494 | 502 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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