| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00055978m |
| Family | GT29 |
| Protein Properties | Length: 282 Molecular Weight: 31223.5 Isoelectric Point: 8.1964 |
| Chromosome | Chromosome/Scaffold: 074367 Start: 3559 End: 4404 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT29 | 50 | 260 | 0 |
| PGRIPSCAVVGNSGILLRANHGALIDSHDAVFRLNNARIAGYAAHVGSKTNFSFINSNVLHLCARRPGCFCHPYGHGVPILLYICQAAHFLDIAACNTTS SSRHGSPISCTDARLDVLCARIVKYYSLRRFVAETGRAAEDWNRAHDAAMFHYSSGMQAIMVAVGVCDRVSVFGFGKSSDAKHHYHSNQKAELDLHDYEA EYAFYHDLAEH | |||
| Full Sequence |
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| Protein Sequence Length: 282 Download |
| DHDTLLHPLP RHEQQLHIDP ALRRALRSWH RLRRYDPAVL GSLPSLLSLP GRIPSCAVVG 60 NSGILLRANH GALIDSHDAV FRLNNARIAG YAAHVGSKTN FSFINSNVLH LCARRPGCFC 120 HPYGHGVPIL LYICQAAHFL DIAACNTTSS SRHGSPISCT DARLDVLCAR IVKYYSLRRF 180 VAETGRAAED WNRAHDAAMF HYSSGMQAIM VAVGVCDRVS VFGFGKSSDA KHHYHSNQKA 240 ELDLHDYEAE YAFYHDLAEH PQVVPFLKDA GFAVPPVVFY H* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 2.0e-29 | 55 | 260 | 223 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY76560.1 | 0 | 1 | 281 | 115 | 393 | hypothetical protein OsI_04506 [Oryza sativa Indica Group] |
| RefSeq | NP_001044863.1 | 0 | 1 | 281 | 115 | 393 | Os01g0858900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151877.1 | 0 | 1 | 281 | 115 | 394 | sialyltransferase-like protein [Zea mays] |
| RefSeq | XP_002456665.1 | 0 | 1 | 281 | 117 | 396 | hypothetical protein SORBIDRAFT_03g040480 [Sorghum bicolor] |
| RefSeq | XP_002523786.1 | 0 | 22 | 281 | 169 | 434 | sialyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.00000000000008 | 56 | 238 | 100 | 262 | A Chain A, Epitope Backbone Grafting By Computational Design For Improved Presentation Of Linear Epitopes On Scaffold Proteins |
| PDB | 2wnb_A | 0.00000000000008 | 56 | 238 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.00000000000009 | 56 | 238 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HX130640 | 230 | 52 | 281 | 0 |
| GD019237 | 230 | 37 | 266 | 0 |
| DR939789 | 228 | 55 | 282 | 0 |
| CN948046 | 218 | 52 | 269 | 0 |
| GD019237 | 29 | 253 | 281 | 0.0006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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