Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056028m |
Family | GT48 |
Protein Properties | Length: 566 Molecular Weight: 65005.2 Isoelectric Point: 9.8158 |
Chromosome | Chromosome/Scaffold: 080092 Start: 319 End: 3381 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 24 | 421 | 0 |
RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDVYRLGHRFDFFRM LSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGKRFIHNEPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVF FTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSG FEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEKEQEPLRLSGKRGIVLEIVLALRFFIYQYGLVYHLNITTHTKSVLVYCLSWVVIFVILLVMK |
Full Sequence |
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Protein Sequence Length: 566 Download |
MGSIYTNMDI SISHYDPSNF MFCRVRFHYG HPDIFDRLFH LTRGGVSKAS KIINLSEDIF 60 AGFNSTLREG NVTHHEYMQV GKGRDVGLNQ ISLFEAKIAN GNGEQTLSRD VYRLGHRFDF 120 FRMLSCYYTT IGFYFSTMIT VWTVYVFLYG RLYLVLSGLD EALATGKRFI HNEPLQVALA 180 SQSFVQLGFL MALPMMMEIG LERGFRTALS DFVLMQLQLA SVFFTFSLGT KTHYYGTTLL 240 HGGAEYRATG RGFVVFHAKF AENYRLYSRS HFVKGIELMI LLIVYEIFGQ SYRGAIAYIF 300 ITFSMWFMVV TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI SNRGGIGVPP EKSWESWWEK 360 EQEPLRLSGK RGIVLEIVLA LRFFIYQYGL VYHLNITTHT KSVLVYCLSW VVIFVILLVM 420 KTVSVGRRRF SAEFQLVFRL IKGLIFITFI SIIIILIAIP HMTVQDIFVC ILAFMPTGWG 480 LLLIAQAIKP AITGVGLWGS IKALARGYEI IMGLLLFTPI AFLAWFPFVS EFQTRMLFNQ 540 AFSRGLQISR ILGGHKKDRA TRNKE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 6.0e-109 | 25 | 417 | 430 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 24 | 565 | 1428 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 24 | 565 | 1377 | 1918 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | NP_001048628.1 | 0 | 24 | 565 | 367 | 908 | Os02g0832500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001058646.1 | 0 | 24 | 565 | 1331 | 1872 | Os06g0728800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453103.1 | 0 | 24 | 565 | 1401 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |