| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00056040m |
| Family | GH95 |
| Protein Properties | Length: 326 Molecular Weight: 36191.3 Isoelectric Point: 5.3733 |
| Chromosome | Chromosome/Scaffold: 076715 Start: 35 End: 1761 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH95 | 10 | 290 | 0 |
| TYQFSLDKDFLENKAYPLLEGCATFLVDWLIEGQGGYLETNPSTSPEHAFLTPDGQPASVSYSTTMDISIIREVFSAVLLSAEVLGKSDTDLVKNINKAL PRLPPVQIARDRTIMEWALDFQDPEVHHRHLSHLFGLYPGHTITLEKNADVCEAAANSLYKRGEDGPGWSTTWKMALWARLFNSENACRMVLKLITIVPP GEKVDFEGGLYNNLFTAAIAEMLLQSTQNDLYMLPALPRDKWPRGCVKGLRARGDVTVNICWDEGELQEALLWSNHGNSVT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 326 Download |
| MAMHTSCGST YQFSLDKDFL ENKAYPLLEG CATFLVDWLI EGQGGYLETN PSTSPEHAFL 60 TPDGQPASVS YSTTMDISII REVFSAVLLS AEVLGKSDTD LVKNINKALP RLPPVQIARD 120 RTIMEWALDF QDPEVHHRHL SHLFGLYPGH TITLEKNADV CEAAANSLYK RGEDGPGWST 180 TWKMALWARL FNSENACRMV LKLITIVPPG EKVDFEGGLY NNLFTAAIAE MLLQSTQNDL 240 YMLPALPRDK WPRGCVKGLR ARGDVTVNIC WDEGELQEAL LWSNHGNSVT RLHYGELVTT 300 IAVSSSTVYK VNRALQCLEA WPLGK* |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG66022.1 | 0 | 11 | 321 | 484 | 812 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABG66023.1 | 0 | 11 | 321 | 377 | 705 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC66760.1 | 0 | 11 | 323 | 524 | 851 | hypothetical protein OsI_33136 [Oryza sativa Indica Group] |
| GenBank | EEC79728.1 | 0 | 11 | 321 | 484 | 812 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
| RefSeq | XP_002461732.1 | 0 | 11 | 281 | 548 | 832 | hypothetical protein SORBIDRAFT_02g007180 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 11 | 276 | 461 | 737 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 11 | 276 | 461 | 737 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eae_A | 8e-21 | 11 | 286 | 518 | 843 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_B | 9e-21 | 11 | 286 | 519 | 844 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_A | 9e-21 | 11 | 286 | 519 | 844 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| JG890568 | 265 | 14 | 264 | 0 |
| JG901756 | 257 | 84 | 326 | 0 |
| GO876621 | 324 | 11 | 319 | 0 |
| ES811142 | 287 | 11 | 283 | 0 |
| JG890568 | 33 | 252 | 284 | 2.5 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
