Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056216m |
Family | AA1 |
Protein Properties | Length: 557 Molecular Weight: 60680.2 Isoelectric Point: 6.7525 |
Chromosome | Chromosome/Scaffold: 075188 Start: 532 End: 3755 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 44 | 505 | 0 |
PQQAILINGQFPGPKIECQTDDNLIINVHNSLPEPFLLSWNGLQQRKNSWQDGVSGTNCPIPPGQNFTYHMQAKDQIGSFFYFPSLAFHKAAGGFGAIHI GTRPLIPVPFPKPADEYTLLIGDWYTTNHKDLQGMLDSGRELPFPDGILINGKRSPNGADFTVEQGKTYRLRISNVGLQNTLNVMIQDHSMTLVEVEGTH TVQNSYTSLDVHVGQSLSVLFAADRPARDYHVVVSTRFANATLRSTAVVRYAGSSGPAFGSLPAGPGDVESSLDQARSIRTNLTASGPRRNPQGSYHYGS INVTRTIRLASSSPGLSAGGERRYAVNGVSFVEADTPLKLADYYNISGVFRLGGIPDAPPAAAGDGAAEGVRRETAVMDSDHRSFVEVVLENGEDGVQSW HLDGHSVFVVGMDLGTWSEESRDSYNLVDAISRCTVQVYPRGWTAVLIALDNVGMWNMRSEV |
Full Sequence |
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Protein Sequence Length: 557 Download |
MAGSKTEALF FLVCLLVVSA AAEGPYRSYD WKVTYGDINP LGTPQQAILI NGQFPGPKIE 60 CQTDDNLIIN VHNSLPEPFL LSWNGLQQRK NSWQDGVSGT NCPIPPGQNF TYHMQAKDQI 120 GSFFYFPSLA FHKAAGGFGA IHIGTRPLIP VPFPKPADEY TLLIGDWYTT NHKDLQGMLD 180 SGRELPFPDG ILINGKRSPN GADFTVEQGK TYRLRISNVG LQNTLNVMIQ DHSMTLVEVE 240 GTHTVQNSYT SLDVHVGQSL SVLFAADRPA RDYHVVVSTR FANATLRSTA VVRYAGSSGP 300 AFGSLPAGPG DVESSLDQAR SIRTNLTASG PRRNPQGSYH YGSINVTRTI RLASSSPGLS 360 AGGERRYAVN GVSFVEADTP LKLADYYNIS GVFRLGGIPD APPAAAGDGA AEGVRRETAV 420 MDSDHRSFVE VVLENGEDGV QSWHLDGHSV FVVGMDLGTW SEESRDSYNL VDAISRCTVQ 480 VYPRGWTAVL IALDNVGMWN MRSEVWARRY LGQQFYLRVY TPTHSLRDEL PIPDNALLCG 540 RAAAASPSRR PARLSR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 6 | 540 | 535 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 5 | 540 | 546 | + copper ion binding / oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 22 | 540 | 523 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 9 | 540 | 535 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 9 | 540 | 545 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67167.1 | 0 | 13 | 550 | 15 | 549 | H0211B05.4 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC77800.1 | 0 | 13 | 550 | 9 | 563 | hypothetical protein OsI_16980 [Oryza sativa Indica Group] |
GenBank | EEE61490.1 | 0 | 13 | 550 | 9 | 563 | hypothetical protein OsJ_15776 [Oryza sativa Japonica Group] |
RefSeq | NP_001053555.1 | 0 | 13 | 550 | 15 | 549 | Os04g0561900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448327.1 | 0 | 9 | 554 | 5 | 572 | hypothetical protein SORBIDRAFT_06g025300 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 545 | 4 | 544 | A Chain A, Peanut Peroxidase |
PDB | 1asq_A | 0 | 27 | 545 | 4 | 544 | A Chain A, Peanut Peroxidase |
PDB | 1asp_B | 0 | 27 | 545 | 4 | 544 | A Chain A, Peanut Peroxidase |
PDB | 1asp_A | 0 | 27 | 545 | 4 | 544 | A Chain A, Peanut Peroxidase |
PDB | 1aso_B | 0 | 27 | 545 | 4 | 544 | A Chain A, Peanut Peroxidase |