Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056263m |
Family | GT31 |
Protein Properties | Length: 364 Molecular Weight: 40926.2 Isoelectric Point: 6.9113 |
Chromosome | Chromosome/Scaffold: 075171 Start: 754 End: 3965 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 108 | 304 | 0 |
KRRDSVRETWMPQGEKLQQLEEQKGIVIRFTIGHSATSNSILDKAIDSEDAQHHDFLRLDHVEGYHELSAKTKIFFSTAVGIWDADFYVKVDDDVHVNLG MLATTLARHKSKPRTYIGCMKSGPVLADKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVNHID |
Full Sequence |
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Protein Sequence Length: 364 Download |
FWTAPDTNNH IMSQRRRQDQ ELQLVSEDCN TKRKHGEDKD IMGEVTKTHE AILSLDKSIS 60 TLQMELAAKR STLELLRSSG SPVTSETSQP RKKAFVVIGV NTAFSSRKRR DSVRETWMPQ 120 GEKLQQLEEQ KGIVIRFTIG HSATSNSILD KAIDSEDAQH HDFLRLDHVE GYHELSAKTK 180 IFFSTAVGIW DADFYVKVDD DVHVNLGMLA TTLARHKSKP RTYIGCMKSG PVLADKNVKY 240 HEPEYWKFGE EGNKYFRHAT GQIYAISKDL ATYISINQPI LHKYANEDVS LGSWFIGLEV 300 NHIDERNMCC GTPPDCEWKG QAGNVCVASF DWSCSGICKS VEKIKDVHAR CGEGDSAVWS 360 ALI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 2.0e-5 | 73 | 308 | 246 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 5.0e-26 | 1 | 72 | 72 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 1.0e-51 | 108 | 304 | 203 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 2 | 361 | 369 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79671.1 | 0 | 1 | 363 | 36 | 398 | unknown [Zea mays] |
GenBank | ACG41551.1 | 0 | 1 | 363 | 36 | 398 | avr9 elicitor response protein [Zea mays] |
GenBank | ACN34486.1 | 0 | 1 | 363 | 36 | 398 | unknown [Zea mays] |
DDBJ | BAD17751.1 | 0 | 1 | 363 | 38 | 400 | putative avr9 elicitor response protein [Oryza sativa Japonica Group] |
RefSeq | XP_002454032.1 | 0 | 1 | 363 | 36 | 398 | hypothetical protein SORBIDRAFT_04g023470 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO871487 | 339 | 26 | 364 | 0 |
CK268505 | 275 | 90 | 364 | 0 |
CB678830 | 259 | 47 | 305 | 0 |
FL692704 | 251 | 70 | 320 | 0 |
FL838985 | 262 | 65 | 326 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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