Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056286m |
Family | GH47 |
Protein Properties | Length: 347 Molecular Weight: 39718.7 Isoelectric Point: 5.9471 |
Chromosome | Chromosome/Scaffold: 078305 Start: 75 End: 4321 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 106 | 345 | 0 |
AMLHAWNSYVKYAWGMDELQPQSKNGINSFGGLGATLVDSLDTLYIMGLKDEFQKARDWVAESLDFDKDYDASVFETTIRVVGGLLSVYDLSGDKVFLEK AKDITDRLLPAWETTSGIPYNRINLAHGRAHNPGWTNGDSILADSGTEQLEFIALSQRTGDPKYQQKAENVITQLQKIYPSDGLLPIYINPHSGTASYST ITFGAMGDSFYEYLLKVWIQGNKTEHVKHYRQMWETSMEG |
Full Sequence |
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Protein Sequence Length: 347 Download |
MARRSSSSSS GVWRYLNPAY YLKRPKRLAL LFFVFVAATF AFWDRQSLVR EYESEISKLE 60 DDINRLQDQL RKAGVHVDEN PTKYTRKDLV EFDPVNNERR EKVKEAMLHA WNSYVKYAWG 120 MDELQPQSKN GINSFGGLGA TLVDSLDTLY IMGLKDEFQK ARDWVAESLD FDKDYDASVF 180 ETTIRVVGGL LSVYDLSGDK VFLEKAKDIT DRLLPAWETT SGIPYNRINL AHGRAHNPGW 240 TNGDSILADS GTEQLEFIAL SQRTGDPKYQ QKAENVITQL QKIYPSDGLL PIYINPHSGT 300 ASYSTITFGA MGDSFYEYLL KVWIQGNKTE HVKHYRQMWE TSMEGLI |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 9.0e-109 | 79 | 347 | 272 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-117 | 106 | 347 | 245 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34773.1 | 0 | 1 | 347 | 1 | 351 | unknown [Zea mays] |
EMBL | CAH66776.1 | 0 | 1 | 347 | 1 | 351 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001053800.1 | 0 | 1 | 347 | 1 | 351 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002310939.1 | 0 | 1 | 347 | 1 | 347 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002448484.1 | 0 | 1 | 347 | 1 | 350 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 94 | 330 | 4 | 241 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 94 | 330 | 4 | 241 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 94 | 330 | 4 | 241 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1nxc_A | 0 | 93 | 330 | 14 | 255 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1x9d_A | 0 | 94 | 330 | 82 | 319 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |