Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056422m |
Family | GH27 |
Protein Properties | Length: 332 Molecular Weight: 36555.7 Isoelectric Point: 6.04 |
Chromosome | Chromosome/Scaffold: 079246 Start: 1076 End: 3835 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 74 | 268 | 2.8026e-45 |
MPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKNIFFSLCEWGRENPATWAGSMGNSWRTTDDIADNWGSMTSRADQNDRWA SYAGPGGWNDPDMLEVGNGGMSEVEYRSHFSIWALAKAPLLIGCDVRSMSQQTKDILTNWEVIAVNQDSLGVQGKKVQSNNGLEVWAGPLNNNRK |
Full Sequence |
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Protein Sequence Length: 332 Download |
ADALVNTGLA KLGYEYVNID DCWAESDRDY QGNFVANRQT FPSGIKALAD YVHAKGLKLG 60 IYSDAGTRTC SKKMPGSLDH EEQDVKTFSS WGIDYLKYDN CNDAGRSVME RYTKMSNAMK 120 TYGKNIFFSL CEWGRENPAT WAGSMGNSWR TTDDIADNWG SMTSRADQND RWASYAGPGG 180 WNDPDMLEVG NGGMSEVEYR SHFSIWALAK APLLIGCDVR SMSQQTKDIL TNWEVIAVNQ 240 DSLGVQGKKV QSNNGLEVWA GPLNNNRKAV VLWNRQGYQA TITAQWSSIG LASSTAVTAR 300 DLWAHSSFSA QGQLSASVAP HDCKMYVLTP K* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 7.0e-19 | 4 | 244 | 326 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 3.0e-19 | 10 | 241 | 305 | + Melibiase. | ||
PLN02692 | PLN02692 | 9.0e-163 | 1 | 330 | 332 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 3.0e-167 | 1 | 330 | 335 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 1 | 331 | 332 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1UAS | 0 | 1 | 330 | 32 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
GenBank | ACF80887.1 | 0 | 1 | 330 | 93 | 422 | unknown [Zea mays] |
RefSeq | NP_001142381.1 | 0 | 1 | 330 | 93 | 422 | hypothetical protein LOC100274554 [Zea mays] |
Swiss-Prot | Q9FXT4 | 0 | 1 | 330 | 87 | 416 | AGAL_ORYSJ RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
RefSeq | XP_002467020.1 | 0 | 1 | 330 | 96 | 425 | hypothetical protein SORBIDRAFT_01g018400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 330 | 32 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 1 | 325 | 32 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 1 | 331 | 42 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 1 | 331 | 42 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 1 | 276 | 42 | 326 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH194075 | 311 | 22 | 332 | 0 |
JG955138 | 283 | 1 | 283 | 0 |
GT034265 | 304 | 1 | 304 | 0 |
EB670133 | 272 | 32 | 303 | 0 |
FL919009 | 259 | 10 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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