| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00056586m |
| Family | GH17 |
| Protein Properties | Length: 446 Molecular Weight: 46545.9 Isoelectric Point: 8.8515 |
| Chromosome | Chromosome/Scaffold: 074559 Start: 349 End: 1971 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 27 | 349 | 0 |
| LGISYGRVGNNLPPATSVPRIVASLGVGRVRLYDADPATIRAFANTGVELAVGVPDECLAAGSTPTGAASWVRSNIAPALPATKIAFLTVGNEVLTGANS SSLSRYLLPAMQCLHDALAQAGLDKQIAVTTAHNLGVLATSYPPSSAYFRKDLLPVLCPILDFHARAGSPFLVNAYPYFAYAEEPTGVELEYALLEPGHA GVADPGSGLHYTNMLAAQVDAVYHAIGAANSAAARAVEVRVSETGWPSAGDANETGATPQNAARYNGNVMRLVAQGKGTPLRPSVPLRVYMFALFNENMK PGPTSERNYGLFKPDGTPAYELS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 446 Download |
| MAALLPLLPA LLLLLPSTPE ATSSAMLGIS YGRVGNNLPP ATSVPRIVAS LGVGRVRLYD 60 ADPATIRAFA NTGVELAVGV PDECLAAGST PTGAASWVRS NIAPALPATK IAFLTVGNEV 120 LTGANSSSLS RYLLPAMQCL HDALAQAGLD KQIAVTTAHN LGVLATSYPP SSAYFRKDLL 180 PVLCPILDFH ARAGSPFLVN AYPYFAYAEE PTGVELEYAL LEPGHAGVAD PGSGLHYTNM 240 LAAQVDAVYH AIGAANSAAA RAVEVRVSET GWPSAGDANE TGATPQNAAR YNGNVMRLVA 300 QGKGTPLRPS VPLRVYMFAL FNENMKPGPT SERNYGLFKP DGTPAYELSY RLPQDNNTSS 360 GGGGVIAGGG VYNGHGYGSD NGGYYSISAA GRVTMGCKWG GFCRKPTGST RTANPLNPCR 420 EPASLKRATR LWSRYPTAPQ RPPKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-89 | 27 | 350 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN04212.1 | 0 | 22 | 392 | 20 | 394 | Putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | EEC66593.1 | 0 | 22 | 399 | 21 | 403 | hypothetical protein OsI_32809 [Oryza sativa Indica Group] |
| RefSeq | NP_001064205.1 | 0 | 22 | 399 | 20 | 401 | Os10g0160100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149928.1 | 0 | 17 | 396 | 19 | 400 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
| RefSeq | XP_002467322.1 | 0 | 16 | 396 | 15 | 395 | hypothetical protein SORBIDRAFT_01g025310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 27 | 352 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 27 | 352 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 27 | 352 | 3 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 27 | 352 | 3 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
