| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00056880m |
| Family | GT66 |
| Protein Properties | Length: 510 Molecular Weight: 56767.1 Isoelectric Point: 9.7868 |
| Chromosome | Chromosome/Scaffold: 077898 Start: 941 End: 4113 |
| Description | staurosporin and temperature sensitive 3-like A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 3 | 438 | 0 |
| QVFIILHVVALVYYIKGLLSPRLFKVAMTLVISVGLAVCFAVVAVLIALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLA FLIPAGIISCFLPLSDASSFMVLYLVTAVYFSGVMVRLMLVLAPAACILSGIALSEVFGVLTRSIKFQLSKFFDDSSAAVSASGDSSPESSTNSTKSENR NEKSETAAKEKPSKKNRKKEKEVAESVPVKTKKEKRLLVLPFELSIMGILLLIVLGGFYVVHCVWAAAEAYSAPSIVLTSRSRDGLHVFDDFREAYAWLS HNTDVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTALSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEP DYLRDGQYRVDAQATPTMLNCLMYKLCYYRFVETDG | |||
| Full Sequence |
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| Protein Sequence Length: 510 Download |
| LLQVFIILHV VALVYYIKGL LSPRLFKVAM TLVISVGLAV CFAVVAVLIA LVASSPTKGW 60 SGRSLSLLDP TYASKYIPII ASVSEHQPPT WPSYFMDINV LAFLIPAGII SCFLPLSDAS 120 SFMVLYLVTA VYFSGVMVRL MLVLAPAACI LSGIALSEVF GVLTRSIKFQ LSKFFDDSSA 180 AVSASGDSSP ESSTNSTKSE NRNEKSETAA KEKPSKKNRK KEKEVAESVP VKTKKEKRLL 240 VLPFELSIMG ILLLIVLGGF YVVHCVWAAA EAYSAPSIVL TSRSRDGLHV FDDFREAYAW 300 LSHNTDVDDK VASWWDYGYQ TTAMANRTVI VDNNTWNNTH IATVGTALSS PEKAAWEIFN 360 SLDVKYVLVV FGGLVGYPSD DINKFLWMVR IGGGVFPHIK EPDYLRDGQY RVDAQATPTM 420 LNCLMYKLCY YRFVETDGKG FDRVRGYEIG KKHFKLTHFE EVFTTHHWMV RIYKLKPQKN 480 RVRGKLKKLK SNAKTSSTLA AGRKKNPWQ* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1287 | COG1287 | 2.0e-9 | 1 | 160 | 163 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| COG1287 | COG1287 | 2.0e-12 | 266 | 483 | 244 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 3.0e-16 | 1 | 160 | 161 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| pfam02516 | STT3 | 1.0e-30 | 260 | 435 | 185 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79544.1 | 0 | 4 | 509 | 611 | 1119 | hypothetical protein OsI_20658 [Oryza sativa Indica Group] |
| RefSeq | NP_001056068.1 | 0 | 4 | 509 | 279 | 787 | Os05g0519900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146306.1 | 0 | 4 | 509 | 228 | 718 | hypothetical protein LOC100279881 [Zea mays] |
| RefSeq | XP_002441399.1 | 0 | 4 | 509 | 280 | 782 | hypothetical protein SORBIDRAFT_09g025920 [Sorghum bicolor] |
| RefSeq | XP_002456347.1 | 0 | 4 | 509 | 215 | 705 | hypothetical protein SORBIDRAFT_03g034385 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 264 | 507 | 20 | 267 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.00007 | 293 | 409 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.00007 | 293 | 409 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.00007 | 293 | 409 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
