CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00056995m
FamilyGT4
Protein PropertiesLength: 420 Molecular Weight: 46335.6 Isoelectric Point: 7.9348
ChromosomeChromosome/Scaffold: 028441 Start: 2790 End: 5283
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42243875.5e-40
  FLSINRFERKKNLDLAISAFALLRSVASTLPGDALQDATLTVAGGYDKRLKENVDYLEELKRLAVTEGVSGQVKFVTSCSTSERNELLSNCLCVLYTPKD
  EHFGIVPLEAMAAHKPVIACNSGGPVETVVNEVTGFLCDPSPTEFSKAMLKLVNDHDLTVRMGK
Full Sequence
Protein Sequence     Length: 420     Download
MAAAGGGAGG SSPSGTRQRK LKVAVIHPDL GIGGAERLIV DAACQLAAHG HDVHVFTSHH    60
DKNRCFEETV SGPFPVTVYG DFLPRHVFYR FHAVCAYLRC IFVALCVLLW WPSFDVILVD    120
QVSVVIPLLK LKSSSKIVFY CHFPDLLLAQ HSTMLRRLYR KPIDMIEEAT TGMANLILVN    180
SKFTAATFAR TFRGLHARGI EPAVLYPAVS VEQFHEPHAY KLNFLSINRF ERKKNLDLAI    240
SAFALLRSVA STLPGDALQD ATLTVAGGYD KRLKENVDYL EELKRLAVTE GVSGQVKFVT    300
SCSTSERNEL LSNCLCVLYT PKDEHFGIVP LEAMAAHKPV IACNSGGPVE TVVNEVTGFL    360
CDPSPTEFSK AMLKLVNDHD LTVRMGKQAR DHVVQKFSTK TFGDLLNSYI LNAYHERME*    420

Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03798GT1_wlbH_like4.0e-3427398391+
cd03811GT1_WabH_like2.0e-3522398391+
COG0438RfaG6.0e-3619417408+
cd03801GT1_YqgM_like1.0e-4822398392+
cd03805GT1_ALG2_like021404397+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU21459.10204148402unknown [Glycine max]
GenBankEAY95346.101341912418hypothetical protein OsI_17177 [Oryza sativa Indica Group]
RefSeqNP_001053699.101341912418Os04g0589600 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002317454.10184122406predicted protein [Populus trichocarpa]
RefSeqXP_002447012.101441913418hypothetical protein SORBIDRAFT_06g026860 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A4e-2022438026164A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB2jjm_L0.0000001309400280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.0000001309400280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.0000001309400280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I0.0000001309400280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5462EC-2.4.1.132GDP-Man:Man1GlcNAc2-PP-Dol α-1,3-mannosyltransferase
dolichyl-diphosphooligosaccharide biosynthesisRXN-5463EC-2.4.1.257GDP-Man:Man2GlcNAc2-PP-Dol α-1,6-mannosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO874725340163520
GO851037295163100
CN129110268162830
GO848903319163310
GO865623275162900
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny