| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00057126m |
| Family | GT77 |
| Protein Properties | Length: 362 Molecular Weight: 41285.7 Isoelectric Point: 7.3912 |
| Chromosome | Chromosome/Scaffold: 028506 Start: 1 End: 3357 |
| Description | xyloglucanase 113 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT77 | 34 | 258 | 0 |
| VDNLLVGAMDTKLLRELYLRGVPVFDMGSRMATEDAGWGSPTFHKMGREKVLLINALLPFGYELLMCDTDMVWLKNPLPYLARYPDADLLTSSDQVIPTV TDDSLENWREVTGAFNIGIFHWRPTEPSKRLAKDWKDLVLSDDKLWDQNAFNDLVHKVFGQPVEGQGDLVYSYDGKLKLGVLPASIFCSGHTYFVQGMYK QLHLEPYGVHTTFQYAGTEGKRHRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 362 Download |
| RRRARGGVIV VTFGNYAFLD FILTWVRHLT GLGVDNLLVG AMDTKLLREL YLRGVPVFDM 60 GSRMATEDAG WGSPTFHKMG REKVLLINAL LPFGYELLMC DTDMVWLKNP LPYLARYPDA 120 DLLTSSDQVI PTVTDDSLEN WREVTGAFNI GIFHWRPTEP SKRLAKDWKD LVLSDDKLWD 180 QNAFNDLVHK VFGQPVEGQG DLVYSYDGKL KLGVLPASIF CSGHTYFVQG MYKQLHLEPY 240 GVHTTFQYAG TEGKRHRLRE AMLFFDQPSY YDSPGGFLSF KPNIPKSLLL DGAHTVESHF 300 ALVNYQLKQI RTALAIASLL KRTLVMPPLW CRLDRMWFGH PGVMEGTMTR QPFLCPMDHV 360 FE |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 3.0e-47 | 34 | 258 | 231 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF97349.1 | 0 | 3 | 362 | 101 | 460 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC75649.1 | 0 | 3 | 362 | 101 | 460 | hypothetical protein OsI_12401 [Oryza sativa Indica Group] |
| GenBank | EEE59420.1 | 0 | 37 | 362 | 71 | 396 | hypothetical protein OsJ_11574 [Oryza sativa Japonica Group] |
| RefSeq | NP_001143144.1 | 0 | 3 | 362 | 99 | 457 | hypothetical protein LOC100275624 [Zea mays] |
| RefSeq | XP_002464281.1 | 0 | 3 | 362 | 99 | 457 | hypothetical protein SORBIDRAFT_01g015590 [Sorghum bicolor] |
